Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21480 and BWI76_RS21485 are separated by 344 nucleotides BWI76_RS21485 and BWI76_RS21490 overlap by 8 nucleotides
BWI76_RS21480: BWI76_RS21480 - phospho-2-dehydro-3-deoxyheptonate aldolase, at 4,499,820 to 4,500,890
_RS21480
BWI76_RS21485: BWI76_RS21485 - DUF4154 domain-containing protein, at 4,501,235 to 4,501,744
_RS21485
BWI76_RS21490: BWI76_RS21490 - GGDEF domain-containing protein, at 4,501,737 to 4,502,960
_RS21490
Position (kb)
4501
4502 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4500.384 kb on - strand, within BWI76_RS21480 at 4500.440 kb on - strand, within BWI76_RS21480 at 4500.481 kb on + strand, within BWI76_RS21480 at 4500.584 kb on + strand, within BWI76_RS21480 at 4500.623 kb on + strand, within BWI76_RS21480 at 4500.631 kb on - strand, within BWI76_RS21480 at 4500.634 kb on + strand, within BWI76_RS21480 at 4500.641 kb on + strand, within BWI76_RS21480 at 4500.827 kb on + strand at 4501.193 kb on - strand at 4501.220 kb on + strand at 4501.241 kb on + strand at 4501.247 kb on - strand at 4501.287 kb on + strand, within BWI76_RS21485 at 4501.287 kb on + strand, within BWI76_RS21485 at 4501.299 kb on + strand, within BWI76_RS21485 at 4501.307 kb on - strand, within BWI76_RS21485 at 4501.347 kb on - strand, within BWI76_RS21485 at 4501.377 kb on + strand, within BWI76_RS21485 at 4501.385 kb on - strand, within BWI76_RS21485 at 4501.385 kb on - strand, within BWI76_RS21485 at 4501.385 kb on - strand, within BWI76_RS21485 at 4501.385 kb on - strand, within BWI76_RS21485 at 4501.385 kb on - strand, within BWI76_RS21485 at 4501.385 kb on - strand, within BWI76_RS21485 at 4501.385 kb on - strand, within BWI76_RS21485 at 4501.414 kb on - strand, within BWI76_RS21485 at 4501.420 kb on - strand, within BWI76_RS21485 at 4501.421 kb on - strand, within BWI76_RS21485 at 4501.421 kb on - strand, within BWI76_RS21485 at 4501.492 kb on - strand, within BWI76_RS21485 at 4501.613 kb on - strand, within BWI76_RS21485 at 4501.613 kb on - strand, within BWI76_RS21485 at 4501.628 kb on - strand, within BWI76_RS21485 at 4501.684 kb on - strand, within BWI76_RS21485 at 4501.697 kb on - strand at 4501.701 kb on + strand at 4501.709 kb on + strand at 4501.709 kb on - strand at 4501.709 kb on - strand at 4501.711 kb on + strand at 4501.758 kb on + strand at 4501.829 kb on + strand at 4501.834 kb on + strand at 4501.834 kb on + strand at 4501.836 kb on + strand at 4501.836 kb on + strand at 4501.836 kb on + strand at 4501.844 kb on - strand at 4502.108 kb on + strand, within BWI76_RS21490 at 4502.277 kb on - strand, within BWI76_RS21490 at 4502.303 kb on - strand, within BWI76_RS21490 at 4502.466 kb on + strand, within BWI76_RS21490 at 4502.490 kb on + strand, within BWI76_RS21490 at 4502.504 kb on + strand, within BWI76_RS21490 at 4502.512 kb on - strand, within BWI76_RS21490 at 4502.543 kb on + strand, within BWI76_RS21490 at 4502.567 kb on - strand, within BWI76_RS21490 at 4502.569 kb on + strand, within BWI76_RS21490 at 4502.599 kb on + strand, within BWI76_RS21490 at 4502.600 kb on + strand, within BWI76_RS21490 at 4502.608 kb on - strand, within BWI76_RS21490 at 4502.701 kb on - strand, within BWI76_RS21490
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 4,500,384 - BWI76_RS21480 0.53 -0.2 4,500,440 - BWI76_RS21480 0.58 +0.0 4,500,481 + BWI76_RS21480 0.62 -2.8 4,500,584 + BWI76_RS21480 0.71 -0.7 4,500,623 + BWI76_RS21480 0.75 -2.3 4,500,631 - BWI76_RS21480 0.76 -0.4 4,500,634 + BWI76_RS21480 0.76 -0.8 4,500,641 + BWI76_RS21480 0.77 -1.5 4,500,827 + -2.1 4,501,193 - +0.8 4,501,220 + -1.2 4,501,241 + +0.0 4,501,247 - +2.0 4,501,287 + BWI76_RS21485 0.10 +0.3 4,501,287 + BWI76_RS21485 0.10 -0.6 4,501,299 + BWI76_RS21485 0.13 +0.6 4,501,307 - BWI76_RS21485 0.14 +1.4 4,501,347 - BWI76_RS21485 0.22 +0.4 4,501,377 + BWI76_RS21485 0.28 +1.3 4,501,385 - BWI76_RS21485 0.29 +1.8 4,501,385 - BWI76_RS21485 0.29 +2.0 4,501,385 - BWI76_RS21485 0.29 +1.8 4,501,385 - BWI76_RS21485 0.29 +0.8 4,501,385 - BWI76_RS21485 0.29 +1.7 4,501,385 - BWI76_RS21485 0.29 +1.3 4,501,385 - BWI76_RS21485 0.29 +0.2 4,501,414 - BWI76_RS21485 0.35 -0.6 4,501,420 - BWI76_RS21485 0.36 +1.7 4,501,421 - BWI76_RS21485 0.36 +1.5 4,501,421 - BWI76_RS21485 0.36 -1.9 4,501,492 - BWI76_RS21485 0.50 +3.2 4,501,613 - BWI76_RS21485 0.74 +3.0 4,501,613 - BWI76_RS21485 0.74 +1.6 4,501,628 - BWI76_RS21485 0.77 +2.7 4,501,684 - BWI76_RS21485 0.88 +1.9 4,501,697 - +2.4 4,501,701 + -1.6 4,501,709 + +0.8 4,501,709 - +1.2 4,501,709 - +2.5 4,501,711 + -3.5 4,501,758 + +1.6 4,501,829 + +0.8 4,501,834 + +0.7 4,501,834 + +0.5 4,501,836 + +0.5 4,501,836 + +1.2 4,501,836 + +1.2 4,501,844 - -0.4 4,502,108 + BWI76_RS21490 0.30 +2.4 4,502,277 - BWI76_RS21490 0.44 +0.5 4,502,303 - BWI76_RS21490 0.46 +0.9 4,502,466 + BWI76_RS21490 0.60 +0.2 4,502,490 + BWI76_RS21490 0.62 +0.3 4,502,504 + BWI76_RS21490 0.63 +1.3 4,502,512 - BWI76_RS21490 0.63 +0.2 4,502,543 + BWI76_RS21490 0.66 -2.7 4,502,567 - BWI76_RS21490 0.68 +0.7 4,502,569 + BWI76_RS21490 0.68 +2.3 4,502,599 + BWI76_RS21490 0.70 +1.4 4,502,600 + BWI76_RS21490 0.71 +2.2 4,502,608 - BWI76_RS21490 0.71 +0.8 4,502,701 - BWI76_RS21490 0.79 +1.5
Or see this region's nucleotide sequence