Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11705 and BWI76_RS11710 are separated by 34 nucleotides BWI76_RS11710 and BWI76_RS11715 are separated by 102 nucleotides BWI76_RS11715 and BWI76_RS11720 are separated by 230 nucleotides BWI76_RS11720 and BWI76_RS11725 are separated by 285 nucleotides
BWI76_RS11705: BWI76_RS11705 - hypothetical protein, at 2,462,475 to 2,464,517
_RS11705
BWI76_RS11710: BWI76_RS11710 - nucleotide excision repair endonuclease, at 2,464,552 to 2,465,412
_RS11710
BWI76_RS11715: BWI76_RS11715 - NAD(+) synthetase, at 2,465,515 to 2,466,342
_RS11715
BWI76_RS11720: BWI76_RS11720 - transcriptional regulator, at 2,466,573 to 2,466,911
_RS11720
BWI76_RS11725: BWI76_RS11725 - PTS sugar transporter subunit IIB, at 2,467,197 to 2,467,517
_RS11725
Position (kb)
2465
2466
2467 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2464.567 kb on - strand at 2464.988 kb on - strand, within BWI76_RS11710 at 2465.039 kb on - strand, within BWI76_RS11710 at 2465.052 kb on + strand, within BWI76_RS11710 at 2465.137 kb on - strand, within BWI76_RS11710 at 2466.391 kb on - strand at 2466.391 kb on - strand at 2466.391 kb on - strand at 2466.402 kb on - strand at 2466.451 kb on + strand at 2466.583 kb on - strand at 2466.620 kb on - strand, within BWI76_RS11720 at 2466.620 kb on - strand, within BWI76_RS11720 at 2466.620 kb on - strand, within BWI76_RS11720 at 2466.626 kb on - strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.639 kb on + strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.647 kb on - strand, within BWI76_RS11720 at 2466.750 kb on + strand, within BWI76_RS11720 at 2466.894 kb on - strand at 2466.894 kb on - strand at 2466.981 kb on - strand at 2466.983 kb on - strand at 2467.031 kb on - strand at 2467.076 kb on + strand at 2467.088 kb on + strand at 2467.090 kb on + strand at 2467.140 kb on + strand at 2467.140 kb on + strand at 2467.148 kb on - strand at 2467.148 kb on - strand at 2467.148 kb on - strand at 2467.148 kb on - strand at 2467.148 kb on - strand at 2467.148 kb on - strand at 2467.174 kb on - strand at 2467.215 kb on + strand at 2467.220 kb on + strand at 2467.220 kb on + strand at 2467.220 kb on + strand at 2467.225 kb on + strand at 2467.228 kb on - strand at 2467.228 kb on - strand at 2467.228 kb on - strand at 2467.235 kb on + strand, within BWI76_RS11725 at 2467.236 kb on - strand, within BWI76_RS11725 at 2467.238 kb on - strand, within BWI76_RS11725 at 2467.243 kb on - strand, within BWI76_RS11725 at 2467.243 kb on - strand, within BWI76_RS11725 at 2467.246 kb on - strand, within BWI76_RS11725 at 2467.282 kb on + strand, within BWI76_RS11725 at 2467.298 kb on - strand, within BWI76_RS11725 at 2467.319 kb on + strand, within BWI76_RS11725 at 2467.327 kb on - strand, within BWI76_RS11725
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 2,464,567 - -0.6 2,464,988 - BWI76_RS11710 0.51 -1.9 2,465,039 - BWI76_RS11710 0.57 +0.6 2,465,052 + BWI76_RS11710 0.58 -0.1 2,465,137 - BWI76_RS11710 0.68 +0.8 2,466,391 - -0.0 2,466,391 - -1.6 2,466,391 - -0.9 2,466,402 - -0.5 2,466,451 + -0.0 2,466,583 - +0.3 2,466,620 - BWI76_RS11720 0.14 -2.8 2,466,620 - BWI76_RS11720 0.14 -0.4 2,466,620 - BWI76_RS11720 0.14 -2.2 2,466,626 - BWI76_RS11720 0.16 -0.2 2,466,639 + BWI76_RS11720 0.19 -0.6 2,466,639 + BWI76_RS11720 0.19 +0.3 2,466,639 + BWI76_RS11720 0.19 +0.5 2,466,639 + BWI76_RS11720 0.19 -0.2 2,466,639 + BWI76_RS11720 0.19 -1.0 2,466,639 + BWI76_RS11720 0.19 +0.0 2,466,639 + BWI76_RS11720 0.19 +0.0 2,466,639 + BWI76_RS11720 0.19 -0.8 2,466,647 - BWI76_RS11720 0.22 -2.6 2,466,647 - BWI76_RS11720 0.22 +1.5 2,466,647 - BWI76_RS11720 0.22 +1.6 2,466,647 - BWI76_RS11720 0.22 -1.2 2,466,647 - BWI76_RS11720 0.22 +0.5 2,466,647 - BWI76_RS11720 0.22 -0.6 2,466,647 - BWI76_RS11720 0.22 -0.6 2,466,647 - BWI76_RS11720 0.22 -2.3 2,466,647 - BWI76_RS11720 0.22 +0.0 2,466,647 - BWI76_RS11720 0.22 +1.0 2,466,647 - BWI76_RS11720 0.22 +0.3 2,466,647 - BWI76_RS11720 0.22 -0.0 2,466,647 - BWI76_RS11720 0.22 +1.5 2,466,750 + BWI76_RS11720 0.52 +1.1 2,466,894 - +0.4 2,466,894 - -1.3 2,466,981 - -0.6 2,466,983 - +1.0 2,467,031 - -0.7 2,467,076 + +2.2 2,467,088 + -0.7 2,467,090 + +0.9 2,467,140 + -0.9 2,467,140 + +0.3 2,467,148 - +0.3 2,467,148 - +0.1 2,467,148 - +1.8 2,467,148 - +0.4 2,467,148 - -0.2 2,467,148 - +1.2 2,467,174 - -2.7 2,467,215 + -0.2 2,467,220 + +0.3 2,467,220 + +1.1 2,467,220 + +2.3 2,467,225 + -1.4 2,467,228 - -0.9 2,467,228 - -1.5 2,467,228 - -1.3 2,467,235 + BWI76_RS11725 0.12 -1.8 2,467,236 - BWI76_RS11725 0.12 -1.7 2,467,238 - BWI76_RS11725 0.13 +0.0 2,467,243 - BWI76_RS11725 0.14 +1.1 2,467,243 - BWI76_RS11725 0.14 -0.1 2,467,246 - BWI76_RS11725 0.15 -0.7 2,467,282 + BWI76_RS11725 0.26 +0.9 2,467,298 - BWI76_RS11725 0.31 +1.3 2,467,319 + BWI76_RS11725 0.38 +2.3 2,467,327 - BWI76_RS11725 0.40 +0.6
Or see this region's nucleotide sequence