Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2207

Experiment: sodium iodide 0.125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodide 0.125 M
2,613,323	+		Pf6N2E2_2206	0.45	-0.7
2,613,324	-		Pf6N2E2_2206	0.45	-0.4
2,613,324	-		Pf6N2E2_2206	0.45	+1.0
2,613,535	+		Pf6N2E2_2206	0.60	-0.8
2,613,536	-		Pf6N2E2_2206	0.60	+0.3
2,613,567	+		Pf6N2E2_2206	0.62	-0.3
2,613,567	+		Pf6N2E2_2206	0.62	+0.1
2,613,789	+		Pf6N2E2_2206	0.78	+0.3
2,613,789	+		Pf6N2E2_2206	0.78	-0.3
2,613,790	-		Pf6N2E2_2206	0.78	-0.6
2,613,790	-		Pf6N2E2_2206	0.78	+0.5
2,613,790	-		Pf6N2E2_2206	0.78	+0.9
2,613,849	+		Pf6N2E2_2206	0.82	-0.3
2,614,111	+				+1.1
2,614,111	+				+0.7
2,614,112	-				+0.6
2,614,167	+				+1.0
2,614,192	-				-1.5
2,614,192	-				-0.3
2,614,192	-				-0.1
2,614,256	+				-0.1
2,614,256	+				-0.1
2,614,261	+				+0.7
2,614,422	+		Pf6N2E2_2207	0.35	+0.0
2,614,423	-		Pf6N2E2_2207	0.35	-1.5
2,614,521	-		Pf6N2E2_2207	0.53	-2.1
2,614,521	-		Pf6N2E2_2207	0.53	+0.7
2,614,521	-		Pf6N2E2_2207	0.53	+0.1
2,614,521	-		Pf6N2E2_2207	0.53	-0.9
2,614,521	-		Pf6N2E2_2207	0.53	-0.7
2,614,592	+		Pf6N2E2_2207	0.66	-0.3
2,614,593	-		Pf6N2E2_2207	0.66	-1.4
2,614,727	+				+0.4
2,614,727	+				-2.4
2,614,728	-				+0.2
2,614,728	-				+0.7
2,614,728	-				+1.1
2,614,902	+		Pf6N2E2_2208	0.13	+0.9
2,614,903	-		Pf6N2E2_2208	0.13	-0.5
2,615,001	+		Pf6N2E2_2208	0.24	+0.4
2,615,001	+		Pf6N2E2_2208	0.24	-0.4
2,615,001	+		Pf6N2E2_2208	0.24	+0.0
2,615,340	+		Pf6N2E2_2208	0.61	+0.2
2,615,481	+		Pf6N2E2_2208	0.77	+0.1
2,615,481	+		Pf6N2E2_2208	0.77	+0.7
2,615,726	+				+1.0
2,615,727	-				-0.5