Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1870

Experiment: sodium iodide 0.125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodide 0.125 M
2,215,788	+		Pf6N2E2_1869	0.32	+0.0
2,215,788	+		Pf6N2E2_1869	0.32	+1.4
2,215,789	-		Pf6N2E2_1869	0.33	-0.8
2,215,789	-		Pf6N2E2_1869	0.33	+0.5
2,215,824	-		Pf6N2E2_1869	0.48	-1.4
2,215,875	+		Pf6N2E2_1869	0.71	+0.7
2,215,875	+		Pf6N2E2_1869	0.71	+0.5
2,215,876	-		Pf6N2E2_1869	0.72	-0.7
2,215,876	-		Pf6N2E2_1869	0.72	-0.6
2,215,907	+		Pf6N2E2_1869	0.85	+0.2
2,215,916	+		Pf6N2E2_1869	0.89	-0.4
2,215,952	+				-0.4
2,216,002	+				-0.2
2,216,032	+				-0.7
2,216,032	+				-0.1
2,216,032	+				-3.3
2,216,044	-				-0.1
2,216,044	-				-0.0
2,216,086	+				+0.2
2,216,429	+				+0.5
2,216,430	-				-0.4
2,216,469	+				+1.0
2,216,470	-				+1.2
2,216,578	+				-1.0
2,216,578	+				+0.2
2,216,579	-				-0.1
2,216,579	-				+0.6
2,216,610	-				+2.2
2,216,683	+				+0.6
2,216,684	-				+0.9
2,216,684	-				-0.2
2,216,739	+				-3.0
2,216,740	-				+0.7
2,216,740	-				-0.8
2,216,740	-				-0.8
2,216,750	-				-0.6
2,216,750	-				+0.7
2,216,938	+		Pf6N2E2_1870	0.40	-0.1
2,216,946	-		Pf6N2E2_1870	0.41	-1.0
2,216,946	-		Pf6N2E2_1870	0.41	-1.0
2,217,263	-				+1.3
2,217,350	+				-0.1
2,217,497	-		Pf6N2E2_1871	0.29	-0.6
2,217,621	+		Pf6N2E2_1871	0.52	+0.0
2,217,621	+		Pf6N2E2_1871	0.52	-0.1
2,217,621	+		Pf6N2E2_1871	0.52	+1.1
2,217,622	-		Pf6N2E2_1871	0.52	+0.2
2,217,678	+		Pf6N2E2_1871	0.63	+0.6
2,217,679	-		Pf6N2E2_1871	0.63	-0.1
2,217,679	-		Pf6N2E2_1871	0.63	-0.2
2,217,739	+		Pf6N2E2_1871	0.74	-1.9
2,217,768	+		Pf6N2E2_1871	0.80	-0.7
2,217,768	+		Pf6N2E2_1871	0.80	-0.2
2,217,769	-		Pf6N2E2_1871	0.80	-0.4
2,217,814	-		Pf6N2E2_1871	0.88	+0.4
2,217,861	+				-0.6
2,217,861	+				-2.3
2,217,861	+				+1.4
2,217,862	-				+0.1
2,217,862	-				+0.3
2,217,873	+				-0.4
2,217,873	+				+0.9
2,217,874	-				-0.6
2,217,874	-				+1.6
2,217,876	+				-0.8
2,217,876	+				-1.1
2,217,876	+				+1.4
2,217,876	+				+0.9
2,217,876	+				-0.8
2,217,876	+				-1.9
2,217,877	-				+0.0
2,217,877	-				-0.7
2,217,877	-				+1.2
2,217,877	-				+1.0
2,217,877	-				+0.4
2,217,877	-				-1.3
2,217,877	-				+0.0
2,218,026	-		Pf6N2E2_1872	0.53	+0.7
2,218,128	+				+0.8
2,218,129	-				-0.1