Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1614

Experiment: sodium iodide 0.125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodide 0.125 M
1,886,745	+				+0.4
1,886,766	-				+0.4
1,886,787	-				-1.1
1,886,791	+				+0.6
1,887,201	+		Pf6N2E2_1613	0.59	-1.2
1,887,201	+		Pf6N2E2_1613	0.59	+0.5
1,887,202	-		Pf6N2E2_1613	0.59	+1.3
1,887,202	-		Pf6N2E2_1613	0.59	-0.5
1,887,202	-		Pf6N2E2_1613	0.59	+0.2
1,887,460	-				-1.1
1,887,460	-				+0.4
1,887,489	+				-0.6
1,887,489	+				-0.8
1,887,489	+				+1.5
1,887,491	+				+1.2
1,887,492	-				+0.9
1,887,492	-				+0.4
1,887,492	-				-0.2
1,887,521	+				-0.4
1,887,521	+				-1.0
1,887,522	-				+1.0
1,887,533	+				-0.3
1,887,533	+				-0.4
1,887,533	+				+0.9
1,887,534	-				-0.3
1,887,551	+				+0.3
1,887,551	+				-0.8
1,887,551	+				+0.0
1,887,591	+				+0.5
1,887,879	-		Pf6N2E2_1614	0.17	+1.0
1,887,879	-		Pf6N2E2_1614	0.17	+0.4
1,887,965	+		Pf6N2E2_1614	0.26	-1.0
1,887,965	+		Pf6N2E2_1614	0.26	-2.0
1,887,966	-		Pf6N2E2_1614	0.27	-0.8
1,887,969	+		Pf6N2E2_1614	0.27	-1.4
1,887,970	-		Pf6N2E2_1614	0.27	+1.2
1,887,970	-		Pf6N2E2_1614	0.27	-0.5
1,887,970	-		Pf6N2E2_1614	0.27	-0.1
1,888,208	-		Pf6N2E2_1614	0.53	-0.5
1,888,336	+		Pf6N2E2_1614	0.67	-1.0
1,888,452	+		Pf6N2E2_1614	0.80	+1.6
1,888,453	-		Pf6N2E2_1614	0.80	-0.5
1,888,456	-		Pf6N2E2_1614	0.81	-0.3
1,888,512	-		Pf6N2E2_1614	0.87	-0.0
1,888,638	-				-0.8
1,888,667	-				+1.1
1,888,670	+				-0.5
1,888,723	-				-1.5
1,888,755	+				-1.8
1,888,756	-				+0.8
1,888,756	-				+0.2
1,888,756	-				+0.4
1,888,756	-				+0.0
1,888,840	+				+0.3
1,888,841	-				-0.4
1,888,930	+		Pf6N2E2_1615	0.17	-1.2
1,888,930	+		Pf6N2E2_1615	0.17	+0.2
1,888,930	+		Pf6N2E2_1615	0.17	+0.2
1,888,930	+		Pf6N2E2_1615	0.17	-2.1
1,888,930	+		Pf6N2E2_1615	0.17	+0.7
1,888,931	-		Pf6N2E2_1615	0.17	+1.4
1,888,941	+		Pf6N2E2_1615	0.18	-0.6
1,889,065	+		Pf6N2E2_1615	0.30	+0.0
1,889,066	-		Pf6N2E2_1615	0.31	-1.1
1,889,113	+		Pf6N2E2_1615	0.35	+0.2
1,889,125	+		Pf6N2E2_1615	0.36	-1.1
1,889,126	-		Pf6N2E2_1615	0.37	-0.3
1,889,128	+		Pf6N2E2_1615	0.37	-0.5
1,889,128	+		Pf6N2E2_1615	0.37	+0.7
1,889,128	+		Pf6N2E2_1615	0.37	-3.0
1,889,338	-		Pf6N2E2_1615	0.58	+0.0