Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00844 and H281DRAFT_00845 are separated by 4 nucleotides H281DRAFT_00845 and H281DRAFT_00846 are separated by 98 nucleotides H281DRAFT_00846 and H281DRAFT_00847 are separated by 130 nucleotides
H281DRAFT_00844: H281DRAFT_00844 - RNA polymerase, sigma 38 subunit, RpoS, at 933,067 to 934,146
_00844
H281DRAFT_00845: H281DRAFT_00845 - hypothetical protein, at 934,151 to 934,927
_00845
H281DRAFT_00846: H281DRAFT_00846 - 23S rRNA m(5)U-1939 methyltransferase, at 935,026 to 936,456
_00846
H281DRAFT_00847: H281DRAFT_00847 - Beta-barrel assembly machine subunit BamD, at 936,587 to 937,447
_00847
Position (kb) 935
936
937 Strain fitness (log2 ratio) -2
-1
0
1 at 934.436 kb on + strand, within H281DRAFT_00845 at 934.437 kb on - strand, within H281DRAFT_00845 at 934.493 kb on + strand, within H281DRAFT_00845 at 934.574 kb on + strand, within H281DRAFT_00845 at 934.574 kb on + strand, within H281DRAFT_00845 at 934.575 kb on - strand, within H281DRAFT_00845 at 934.575 kb on - strand, within H281DRAFT_00845 at 934.575 kb on - strand, within H281DRAFT_00845 at 934.629 kb on - strand, within H281DRAFT_00845 at 934.758 kb on - strand, within H281DRAFT_00845 at 934.780 kb on + strand, within H281DRAFT_00845 at 934.781 kb on - strand, within H281DRAFT_00845 at 934.781 kb on - strand, within H281DRAFT_00845 at 934.784 kb on + strand, within H281DRAFT_00845 at 934.785 kb on - strand, within H281DRAFT_00845 at 934.785 kb on - strand, within H281DRAFT_00845 at 934.794 kb on - strand, within H281DRAFT_00845 at 934.794 kb on - strand, within H281DRAFT_00845 at 934.794 kb on - strand, within H281DRAFT_00845 at 934.857 kb on + strand at 934.858 kb on - strand at 934.858 kb on - strand at 934.925 kb on + strand at 934.926 kb on - strand at 934.986 kb on - strand at 935.020 kb on + strand at 935.021 kb on - strand at 935.021 kb on - strand at 935.021 kb on - strand at 935.075 kb on - strand at 935.079 kb on + strand at 935.079 kb on + strand at 935.079 kb on + strand at 935.079 kb on + strand at 935.080 kb on - strand at 935.080 kb on - strand at 935.248 kb on + strand, within H281DRAFT_00846 at 935.341 kb on + strand, within H281DRAFT_00846 at 935.342 kb on - strand, within H281DRAFT_00846 at 935.589 kb on + strand, within H281DRAFT_00846 at 935.870 kb on - strand, within H281DRAFT_00846 at 935.870 kb on - strand, within H281DRAFT_00846 at 935.885 kb on - strand, within H281DRAFT_00846 at 935.967 kb on - strand, within H281DRAFT_00846 at 936.062 kb on + strand, within H281DRAFT_00846 at 936.062 kb on + strand, within H281DRAFT_00846 at 936.062 kb on + strand, within H281DRAFT_00846 at 936.063 kb on - strand, within H281DRAFT_00846 at 936.063 kb on - strand, within H281DRAFT_00846 at 936.063 kb on - strand, within H281DRAFT_00846 at 936.303 kb on + strand, within H281DRAFT_00846 at 936.304 kb on - strand, within H281DRAFT_00846 at 936.304 kb on - strand, within H281DRAFT_00846 at 936.310 kb on + strand, within H281DRAFT_00846 at 936.310 kb on + strand, within H281DRAFT_00846 at 936.311 kb on - strand, within H281DRAFT_00846 at 936.491 kb on + strand at 936.492 kb on - strand at 936.536 kb on + strand at 936.536 kb on + strand at 936.536 kb on + strand at 936.536 kb on + strand at 936.536 kb on + strand at 936.537 kb on - strand at 936.588 kb on + strand at 936.589 kb on - strand at 936.639 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 934,436 + H281DRAFT_00845 0.37 +0.4 934,437 - H281DRAFT_00845 0.37 -0.2 934,493 + H281DRAFT_00845 0.44 -0.2 934,574 + H281DRAFT_00845 0.54 -0.2 934,574 + H281DRAFT_00845 0.54 -0.3 934,575 - H281DRAFT_00845 0.55 -0.8 934,575 - H281DRAFT_00845 0.55 -0.2 934,575 - H281DRAFT_00845 0.55 +0.3 934,629 - H281DRAFT_00845 0.62 -1.4 934,758 - H281DRAFT_00845 0.78 -0.8 934,780 + H281DRAFT_00845 0.81 -1.1 934,781 - H281DRAFT_00845 0.81 -1.5 934,781 - H281DRAFT_00845 0.81 -0.1 934,784 + H281DRAFT_00845 0.81 -0.4 934,785 - H281DRAFT_00845 0.82 -2.1 934,785 - H281DRAFT_00845 0.82 +1.0 934,794 - H281DRAFT_00845 0.83 +0.0 934,794 - H281DRAFT_00845 0.83 -0.5 934,794 - H281DRAFT_00845 0.83 +0.1 934,857 + +0.1 934,858 - +0.4 934,858 - +0.3 934,925 + -0.0 934,926 - +0.5 934,986 - +0.0 935,020 + -0.1 935,021 - -0.1 935,021 - +0.6 935,021 - +0.9 935,075 - -0.3 935,079 + -0.3 935,079 + -0.1 935,079 + -0.6 935,079 + +0.1 935,080 - +0.6 935,080 - -0.3 935,248 + H281DRAFT_00846 0.16 -0.0 935,341 + H281DRAFT_00846 0.22 -0.4 935,342 - H281DRAFT_00846 0.22 +0.2 935,589 + H281DRAFT_00846 0.39 -2.0 935,870 - H281DRAFT_00846 0.59 +0.2 935,870 - H281DRAFT_00846 0.59 +0.0 935,885 - H281DRAFT_00846 0.60 -0.1 935,967 - H281DRAFT_00846 0.66 -0.2 936,062 + H281DRAFT_00846 0.72 +0.2 936,062 + H281DRAFT_00846 0.72 -0.8 936,062 + H281DRAFT_00846 0.72 -0.1 936,063 - H281DRAFT_00846 0.72 +0.2 936,063 - H281DRAFT_00846 0.72 +0.2 936,063 - H281DRAFT_00846 0.72 -0.1 936,303 + H281DRAFT_00846 0.89 -0.0 936,304 - H281DRAFT_00846 0.89 +0.9 936,304 - H281DRAFT_00846 0.89 +0.5 936,310 + H281DRAFT_00846 0.90 -0.3 936,310 + H281DRAFT_00846 0.90 -0.3 936,311 - H281DRAFT_00846 0.90 -1.5 936,491 + +0.1 936,492 - -0.3 936,536 + -0.1 936,536 + -0.4 936,536 + -0.4 936,536 + +0.1 936,536 + -0.4 936,537 - +1.4 936,588 + -0.1 936,589 - -0.0 936,639 + +0.2
Or see this region's nucleotide sequence