Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24715 and BWI76_RS24720 are separated by 15 nucleotides BWI76_RS24720 and BWI76_RS24725 are separated by 94 nucleotides BWI76_RS24725 and BWI76_RS24730 are separated by 18 nucleotides
BWI76_RS24715: BWI76_RS24715 - serine/threonine transporter SstT, at 5,154,087 to 5,155,334
_RS24715
BWI76_RS24720: BWI76_RS24720 - hypothetical protein, at 5,155,350 to 5,155,904
_RS24720
BWI76_RS24725: BWI76_RS24725 - altronate hydrolase, at 5,155,999 to 5,157,486
_RS24725
BWI76_RS24730: BWI76_RS24730 - uronate isomerase, at 5,157,505 to 5,158,917
_RS24730
Position (kb)
5155
5156
5157
5158 Strain fitness (log2 ratio)
-1
0
1 at 5155.006 kb on + strand, within BWI76_RS24715 at 5155.365 kb on + strand at 5155.632 kb on - strand, within BWI76_RS24720 at 5155.811 kb on + strand, within BWI76_RS24720 at 5155.886 kb on - strand at 5156.052 kb on + strand at 5156.054 kb on + strand at 5156.054 kb on + strand at 5156.088 kb on - strand at 5156.090 kb on - strand at 5156.278 kb on + strand, within BWI76_RS24725 at 5156.298 kb on - strand, within BWI76_RS24725 at 5156.325 kb on + strand, within BWI76_RS24725 at 5156.497 kb on - strand, within BWI76_RS24725 at 5156.827 kb on - strand, within BWI76_RS24725 at 5156.901 kb on - strand, within BWI76_RS24725 at 5157.201 kb on + strand, within BWI76_RS24725 at 5157.351 kb on + strand at 5157.359 kb on - strand at 5157.359 kb on - strand at 5157.359 kb on - strand at 5157.359 kb on - strand at 5157.417 kb on - strand at 5157.483 kb on + strand at 5157.659 kb on + strand, within BWI76_RS24730 at 5157.713 kb on + strand, within BWI76_RS24730 at 5157.903 kb on - strand, within BWI76_RS24730 at 5158.062 kb on - strand, within BWI76_RS24730 at 5158.088 kb on + strand, within BWI76_RS24730 at 5158.259 kb on + strand, within BWI76_RS24730 at 5158.353 kb on - strand, within BWI76_RS24730
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 5,155,006 + BWI76_RS24715 0.74 -0.2 5,155,365 + +0.0 5,155,632 - BWI76_RS24720 0.51 +0.2 5,155,811 + BWI76_RS24720 0.83 +1.2 5,155,886 - -0.4 5,156,052 + +1.2 5,156,054 + -0.6 5,156,054 + -1.0 5,156,088 - -0.3 5,156,090 - -0.7 5,156,278 + BWI76_RS24725 0.19 -0.6 5,156,298 - BWI76_RS24725 0.20 -0.7 5,156,325 + BWI76_RS24725 0.22 -0.8 5,156,497 - BWI76_RS24725 0.33 -1.5 5,156,827 - BWI76_RS24725 0.56 -0.8 5,156,901 - BWI76_RS24725 0.61 -0.5 5,157,201 + BWI76_RS24725 0.81 -0.6 5,157,351 + +0.5 5,157,359 - -0.3 5,157,359 - +1.0 5,157,359 - +0.3 5,157,359 - -0.2 5,157,417 - -0.4 5,157,483 + -0.1 5,157,659 + BWI76_RS24730 0.11 +0.4 5,157,713 + BWI76_RS24730 0.15 +0.1 5,157,903 - BWI76_RS24730 0.28 +1.1 5,158,062 - BWI76_RS24730 0.39 +0.4 5,158,088 + BWI76_RS24730 0.41 -0.1 5,158,259 + BWI76_RS24730 0.53 -0.0 5,158,353 - BWI76_RS24730 0.60 -0.5
Or see this region's nucleotide sequence