Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06369 and H281DRAFT_06370 are separated by 40 nucleotides H281DRAFT_06370 and H281DRAFT_06371 are separated by 63 nucleotides H281DRAFT_06371 and H281DRAFT_06372 are separated by 59 nucleotides
H281DRAFT_06369: H281DRAFT_06369 - tight adherence protein B, at 41,786 to 42,769
_06369
H281DRAFT_06370: H281DRAFT_06370 - tight adherence protein C, at 42,810 to 43,766
_06370
H281DRAFT_06371: H281DRAFT_06371 - TadE-like protein, at 43,830 to 44,306
_06371
H281DRAFT_06372: H281DRAFT_06372 - TadE-like protein, at 44,366 to 45,418
_06372
Position (kb) 42
43
44 Strain fitness (log2 ratio) -1
0
1 at 41.845 kb on - strand at 41.845 kb on - strand at 41.855 kb on + strand at 41.856 kb on - strand at 42.386 kb on + strand, within H281DRAFT_06369 at 42.387 kb on - strand, within H281DRAFT_06369 at 42.765 kb on + strand at 42.912 kb on - strand, within H281DRAFT_06370 at 43.203 kb on + strand, within H281DRAFT_06370 at 43.204 kb on - strand, within H281DRAFT_06370 at 43.204 kb on - strand, within H281DRAFT_06370 at 43.248 kb on + strand, within H281DRAFT_06370 at 43.251 kb on + strand, within H281DRAFT_06370 at 43.252 kb on - strand, within H281DRAFT_06370 at 43.267 kb on + strand, within H281DRAFT_06370 at 44.052 kb on + strand, within H281DRAFT_06371 at 44.053 kb on - strand, within H281DRAFT_06371 at 44.104 kb on - strand, within H281DRAFT_06371 at 44.116 kb on - strand, within H281DRAFT_06371 at 44.214 kb on + strand, within H281DRAFT_06371 at 44.215 kb on - strand, within H281DRAFT_06371 at 44.215 kb on - strand, within H281DRAFT_06371 at 44.298 kb on + strand at 44.567 kb on + strand, within H281DRAFT_06372 at 44.567 kb on + strand, within H281DRAFT_06372 at 44.568 kb on - strand, within H281DRAFT_06372 at 44.764 kb on - strand, within H281DRAFT_06372
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 41,845 - +0.1 41,845 - +1.1 41,855 + +0.1 41,856 - +0.4 42,386 + H281DRAFT_06369 0.61 +0.2 42,387 - H281DRAFT_06369 0.61 -0.6 42,765 + -0.0 42,912 - H281DRAFT_06370 0.11 +0.9 43,203 + H281DRAFT_06370 0.41 +0.1 43,204 - H281DRAFT_06370 0.41 +0.6 43,204 - H281DRAFT_06370 0.41 +0.8 43,248 + H281DRAFT_06370 0.46 -0.7 43,251 + H281DRAFT_06370 0.46 +0.3 43,252 - H281DRAFT_06370 0.46 +1.3 43,267 + H281DRAFT_06370 0.48 +0.4 44,052 + H281DRAFT_06371 0.47 -0.1 44,053 - H281DRAFT_06371 0.47 +0.0 44,104 - H281DRAFT_06371 0.57 -1.5 44,116 - H281DRAFT_06371 0.60 +0.9 44,214 + H281DRAFT_06371 0.81 -0.0 44,215 - H281DRAFT_06371 0.81 -0.1 44,215 - H281DRAFT_06371 0.81 +0.1 44,298 + +0.3 44,567 + H281DRAFT_06372 0.19 -1.2 44,567 + H281DRAFT_06372 0.19 +0.3 44,568 - H281DRAFT_06372 0.19 +0.4 44,764 - H281DRAFT_06372 0.38 +0.0
Or see this region's nucleotide sequence