Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06337 and H281DRAFT_06338 are separated by 27 nucleotides H281DRAFT_06338 and H281DRAFT_06339 are separated by 81 nucleotides H281DRAFT_06339 and H281DRAFT_06340 are separated by 279 nucleotides
H281DRAFT_06337: H281DRAFT_06337 - Glycine/D-amino acid oxidase (deaminating), at 11,842 to 13,116
_06337
H281DRAFT_06338: H281DRAFT_06338 - 2-haloacid dehalogenase, at 13,144 to 13,812
_06338
H281DRAFT_06339: H281DRAFT_06339 - hypothetical protein, at 13,894 to 14,118
_06339
H281DRAFT_06340: H281DRAFT_06340 - Predicted N-acetyltransferase YhbS, at 14,398 to 15,264
_06340
Position (kb) 13
14 Strain fitness (log2 ratio) -1
0
1 at 12.261 kb on - strand, within H281DRAFT_06337 at 12.261 kb on - strand, within H281DRAFT_06337 at 12.286 kb on - strand, within H281DRAFT_06337 at 12.287 kb on + strand, within H281DRAFT_06337 at 12.574 kb on - strand, within H281DRAFT_06337 at 13.145 kb on + strand at 13.190 kb on + strand at 13.191 kb on - strand at 13.200 kb on - strand at 13.478 kb on + strand, within H281DRAFT_06338 at 13.823 kb on + strand at 13.908 kb on + strand at 14.197 kb on - strand at 14.215 kb on + strand at 14.256 kb on + strand at 14.256 kb on + strand at 14.416 kb on + strand at 14.416 kb on + strand at 14.416 kb on + strand at 14.416 kb on + strand at 14.579 kb on - strand, within H281DRAFT_06340
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 12,261 - H281DRAFT_06337 0.33 -0.2 12,261 - H281DRAFT_06337 0.33 -0.6 12,286 - H281DRAFT_06337 0.35 +0.0 12,287 + H281DRAFT_06337 0.35 -0.1 12,574 - H281DRAFT_06337 0.57 +0.2 13,145 + +0.0 13,190 + -0.1 13,191 - -0.3 13,200 - +0.3 13,478 + H281DRAFT_06338 0.50 +0.5 13,823 + -0.3 13,908 + -0.3 14,197 - +0.6 14,215 + -0.6 14,256 + -0.6 14,256 + -0.2 14,416 + -0.5 14,416 + +0.5 14,416 + +0.5 14,416 + +0.6 14,579 - H281DRAFT_06340 0.21 -0.2
Or see this region's nucleotide sequence