Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05510 and H281DRAFT_05511 are separated by 265 nucleotides H281DRAFT_05511 and H281DRAFT_05512 are separated by 275 nucleotides H281DRAFT_05512 and H281DRAFT_05513 overlap by 7 nucleotides
H281DRAFT_05510: H281DRAFT_05510 - Transposase, at 90,793 to 91,818
_05510
H281DRAFT_05511: H281DRAFT_05511 - acyl-CoA thioester hydrolase, at 92,084 to 92,536
_05511
H281DRAFT_05512: H281DRAFT_05512 - branched-chain amino acid transport system ATP-binding protein, at 92,812 to 93,516
_05512
H281DRAFT_05513: H281DRAFT_05513 - branched-chain amino acid transport system permease protein, at 93,510 to 95,303
_05513
Position (kb) 92
93
94 Strain fitness (log2 ratio) -1
0
1
2 at 91.878 kb on - strand at 91.910 kb on + strand at 91.969 kb on + strand at 92.090 kb on + strand at 92.100 kb on - strand at 92.166 kb on + strand, within H281DRAFT_05511 at 92.182 kb on - strand, within H281DRAFT_05511 at 92.311 kb on - strand, within H281DRAFT_05511 at 92.416 kb on - strand, within H281DRAFT_05511 at 92.504 kb on + strand at 92.747 kb on + strand at 92.822 kb on + strand at 92.982 kb on + strand, within H281DRAFT_05512 at 93.019 kb on + strand, within H281DRAFT_05512 at 93.224 kb on + strand, within H281DRAFT_05512 at 93.224 kb on + strand, within H281DRAFT_05512 at 93.389 kb on - strand, within H281DRAFT_05512 at 93.596 kb on + strand at 93.633 kb on + strand at 93.634 kb on - strand at 93.665 kb on + strand at 93.705 kb on + strand, within H281DRAFT_05513 at 93.971 kb on + strand, within H281DRAFT_05513 at 93.972 kb on - strand, within H281DRAFT_05513 at 93.972 kb on - strand, within H281DRAFT_05513 at 94.121 kb on - strand, within H281DRAFT_05513 at 94.134 kb on - strand, within H281DRAFT_05513 at 94.185 kb on + strand, within H281DRAFT_05513 at 94.186 kb on - strand, within H281DRAFT_05513 at 94.186 kb on - strand at 94.399 kb on - strand, within H281DRAFT_05513 at 94.471 kb on - strand, within H281DRAFT_05513 at 94.471 kb on - strand, within H281DRAFT_05513 at 94.487 kb on + strand, within H281DRAFT_05513
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 91,878 - +1.2 91,910 + -0.9 91,969 + -0.3 92,090 + +0.0 92,100 - -0.4 92,166 + H281DRAFT_05511 0.18 -0.1 92,182 - H281DRAFT_05511 0.22 +0.6 92,311 - H281DRAFT_05511 0.50 -0.2 92,416 - H281DRAFT_05511 0.73 +0.4 92,504 + -1.1 92,747 + +0.1 92,822 + +0.0 92,982 + H281DRAFT_05512 0.24 +1.7 93,019 + H281DRAFT_05512 0.29 +0.9 93,224 + H281DRAFT_05512 0.58 +1.8 93,224 + H281DRAFT_05512 0.58 -0.0 93,389 - H281DRAFT_05512 0.82 +0.5 93,596 + +0.7 93,633 + +0.2 93,634 - +0.1 93,665 + +0.5 93,705 + H281DRAFT_05513 0.11 -0.2 93,971 + H281DRAFT_05513 0.26 +0.4 93,972 - H281DRAFT_05513 0.26 +1.1 93,972 - H281DRAFT_05513 0.26 -0.7 94,121 - H281DRAFT_05513 0.34 +0.6 94,134 - H281DRAFT_05513 0.35 +0.4 94,185 + H281DRAFT_05513 0.38 -0.2 94,186 - H281DRAFT_05513 0.38 -0.1 94,186 - +2.2 94,399 - H281DRAFT_05513 0.50 -0.0 94,471 - H281DRAFT_05513 0.54 -0.2 94,471 - H281DRAFT_05513 0.54 +0.1 94,487 + H281DRAFT_05513 0.54 -0.9
Or see this region's nucleotide sequence