Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04643 and H281DRAFT_04644 are separated by 40 nucleotides H281DRAFT_04644 and H281DRAFT_04645 are separated by 76 nucleotides H281DRAFT_04645 and H281DRAFT_04646 are separated by 44 nucleotides H281DRAFT_04646 and H281DRAFT_04647 are separated by 40 nucleotides
H281DRAFT_04643: H281DRAFT_04643 - methylmalonyl-CoA epimerase, at 44,625 to 45,011
_04643
H281DRAFT_04644: H281DRAFT_04644 - hypothetical protein, at 45,052 to 45,450
_04644
H281DRAFT_04645: H281DRAFT_04645 - hypothetical protein, at 45,527 to 46,414
_04645
H281DRAFT_04646: H281DRAFT_04646 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 46,459 to 47,217
_04646
H281DRAFT_04647: H281DRAFT_04647 - D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase, at 47,258 to 47,812
_04647
Position (kb) 45
46
47 Strain fitness (log2 ratio) -2
-1
0
1 at 44.586 kb on - strand at 44.591 kb on + strand at 44.591 kb on + strand at 44.619 kb on + strand at 44.682 kb on + strand, within H281DRAFT_04643 at 44.682 kb on + strand, within H281DRAFT_04643 at 44.707 kb on + strand, within H281DRAFT_04643 at 44.725 kb on - strand, within H281DRAFT_04643 at 44.821 kb on - strand, within H281DRAFT_04643 at 44.821 kb on - strand, within H281DRAFT_04643 at 44.871 kb on + strand, within H281DRAFT_04643 at 44.872 kb on - strand, within H281DRAFT_04643 at 44.872 kb on - strand, within H281DRAFT_04643 at 45.070 kb on + strand at 45.070 kb on + strand at 45.448 kb on + strand at 45.672 kb on + strand, within H281DRAFT_04645 at 45.673 kb on - strand, within H281DRAFT_04645 at 45.673 kb on - strand, within H281DRAFT_04645 at 45.783 kb on + strand, within H281DRAFT_04645 at 45.784 kb on - strand, within H281DRAFT_04645 at 45.991 kb on - strand, within H281DRAFT_04645 at 46.399 kb on + strand at 46.616 kb on - strand, within H281DRAFT_04646 at 46.616 kb on - strand, within H281DRAFT_04646 at 47.200 kb on - strand at 47.231 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 44,586 - -1.0 44,591 + -0.9 44,591 + -1.1 44,619 + -0.5 44,682 + H281DRAFT_04643 0.15 -0.3 44,682 + H281DRAFT_04643 0.15 -2.3 44,707 + H281DRAFT_04643 0.21 -1.2 44,725 - H281DRAFT_04643 0.26 -1.2 44,821 - H281DRAFT_04643 0.51 -1.4 44,821 - H281DRAFT_04643 0.51 -2.1 44,871 + H281DRAFT_04643 0.64 -1.3 44,872 - H281DRAFT_04643 0.64 -2.3 44,872 - H281DRAFT_04643 0.64 -0.6 45,070 + +0.4 45,070 + +0.3 45,448 + -0.9 45,672 + H281DRAFT_04645 0.16 -0.1 45,673 - H281DRAFT_04645 0.16 -0.2 45,673 - H281DRAFT_04645 0.16 +0.9 45,783 + H281DRAFT_04645 0.29 +0.4 45,784 - H281DRAFT_04645 0.29 +0.1 45,991 - H281DRAFT_04645 0.52 +0.2 46,399 + +0.8 46,616 - H281DRAFT_04646 0.21 +1.7 46,616 - H281DRAFT_04646 0.21 -0.4 47,200 - +0.6 47,231 - +0.1
Or see this region's nucleotide sequence