Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04413 and H281DRAFT_04414 are separated by 17 nucleotides H281DRAFT_04414 and H281DRAFT_04415 are separated by 29 nucleotides H281DRAFT_04415 and H281DRAFT_04416 are separated by 26 nucleotides H281DRAFT_04416 and H281DRAFT_04417 are separated by 62 nucleotides
H281DRAFT_04413: H281DRAFT_04413 - phosphate ABC transporter membrane protein 2, PhoT family, at 132,531 to 133,427
_04413
H281DRAFT_04414: H281DRAFT_04414 - phosphate ABC transporter ATP-binding protein, PhoT family, at 133,445 to 134,293
_04414
H281DRAFT_04415: H281DRAFT_04415 - phosphate uptake regulator, PhoU, at 134,323 to 135,027
_04415
H281DRAFT_04416: H281DRAFT_04416 - two component transcriptional regulator, winged helix family, at 135,054 to 135,755
_04416
H281DRAFT_04417: H281DRAFT_04417 - two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR, at 135,818 to 137,131
_04417
Position (kb) 134
135
136 Strain fitness (log2 ratio) -1
0
1 at 133.425 kb on + strand at 133.438 kb on + strand at 133.438 kb on + strand at 133.775 kb on - strand, within H281DRAFT_04414 at 133.974 kb on - strand, within H281DRAFT_04414 at 134.181 kb on - strand, within H281DRAFT_04414 at 134.190 kb on - strand, within H281DRAFT_04414 at 134.190 kb on - strand, within H281DRAFT_04414 at 134.192 kb on - strand, within H281DRAFT_04414 at 134.192 kb on - strand at 134.196 kb on - strand, within H281DRAFT_04414 at 134.196 kb on - strand, within H281DRAFT_04414 at 134.271 kb on - strand at 134.317 kb on + strand at 134.849 kb on - strand, within H281DRAFT_04415 at 134.960 kb on - strand at 134.960 kb on - strand at 135.036 kb on + strand at 135.188 kb on - strand, within H281DRAFT_04416 at 135.188 kb on - strand, within H281DRAFT_04416 at 135.188 kb on - strand, within H281DRAFT_04416 at 135.188 kb on - strand, within H281DRAFT_04416 at 135.704 kb on + strand at 135.704 kb on + strand at 135.868 kb on - strand at 135.928 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 133,425 + -0.0 133,438 + +0.1 133,438 + -0.2 133,775 - H281DRAFT_04414 0.39 +0.7 133,974 - H281DRAFT_04414 0.62 -0.4 134,181 - H281DRAFT_04414 0.87 -0.1 134,190 - H281DRAFT_04414 0.88 +0.2 134,190 - H281DRAFT_04414 0.88 -0.9 134,192 - H281DRAFT_04414 0.88 -0.6 134,192 - -1.3 134,196 - H281DRAFT_04414 0.88 +0.3 134,196 - H281DRAFT_04414 0.88 +0.5 134,271 - +0.4 134,317 + +0.4 134,849 - H281DRAFT_04415 0.75 +0.6 134,960 - +0.1 134,960 - +0.4 135,036 + +0.3 135,188 - H281DRAFT_04416 0.19 -0.2 135,188 - H281DRAFT_04416 0.19 +0.1 135,188 - H281DRAFT_04416 0.19 -0.1 135,188 - H281DRAFT_04416 0.19 +0.0 135,704 + +0.1 135,704 + +0.5 135,868 - -0.3 135,928 - +0.4
Or see this region's nucleotide sequence