Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03766 and H281DRAFT_03767 are separated by 143 nucleotides H281DRAFT_03767 and H281DRAFT_03768 are separated by 151 nucleotides H281DRAFT_03768 and H281DRAFT_03769 are separated by 85 nucleotides H281DRAFT_03769 and H281DRAFT_03770 are separated by 175 nucleotides
H281DRAFT_03766: H281DRAFT_03766 - glucose 1-dehydrogenase, at 284,459 to 285,259
_03766
H281DRAFT_03767: H281DRAFT_03767 - Protein of unknown function (DUF3309), at 285,403 to 285,558
_03767
H281DRAFT_03768: H281DRAFT_03768 - Predicted arabinose efflux permease, MFS family, at 285,710 to 286,939
_03768
H281DRAFT_03769: H281DRAFT_03769 - transcriptional regulator, TetR family, at 287,025 to 287,639
_03769
H281DRAFT_03770: H281DRAFT_03770 - hypothetical protein, at 287,815 to 288,021
_03770
Position (kb) 285
286
287 Strain fitness (log2 ratio) -1
0
1 at 284.770 kb on - strand, within H281DRAFT_03766 at 284.774 kb on - strand, within H281DRAFT_03766 at 285.298 kb on + strand at 285.298 kb on + strand at 285.299 kb on - strand at 285.305 kb on - strand at 285.373 kb on + strand at 285.374 kb on - strand at 285.473 kb on + strand, within H281DRAFT_03767 at 285.490 kb on - strand, within H281DRAFT_03767 at 285.558 kb on + strand at 285.558 kb on + strand at 285.558 kb on + strand at 285.558 kb on + strand at 285.559 kb on - strand at 285.559 kb on - strand at 285.559 kb on - strand at 285.559 kb on - strand at 285.559 kb on - strand at 285.560 kb on + strand at 285.705 kb on + strand at 285.706 kb on - strand at 285.810 kb on + strand at 285.810 kb on + strand at 285.810 kb on + strand at 285.837 kb on + strand, within H281DRAFT_03768 at 286.206 kb on + strand, within H281DRAFT_03768 at 286.207 kb on - strand, within H281DRAFT_03768 at 286.207 kb on - strand, within H281DRAFT_03768 at 286.258 kb on - strand, within H281DRAFT_03768 at 286.266 kb on + strand, within H281DRAFT_03768 at 286.267 kb on - strand, within H281DRAFT_03768 at 286.442 kb on + strand, within H281DRAFT_03768 at 286.537 kb on + strand, within H281DRAFT_03768 at 286.537 kb on + strand, within H281DRAFT_03768 at 286.819 kb on - strand at 287.027 kb on - strand at 287.146 kb on - strand, within H281DRAFT_03769 at 287.477 kb on - strand, within H281DRAFT_03769 at 287.507 kb on - strand, within H281DRAFT_03769 at 287.689 kb on - strand at 287.699 kb on + strand at 287.822 kb on + strand at 287.822 kb on + strand at 287.823 kb on - strand at 287.823 kb on - strand at 287.823 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 284,770 - H281DRAFT_03766 0.39 -0.5 284,774 - H281DRAFT_03766 0.39 +0.8 285,298 + -0.1 285,298 + +0.1 285,299 - +0.5 285,305 - -0.3 285,373 + +0.1 285,374 - -0.0 285,473 + H281DRAFT_03767 0.45 -0.9 285,490 - H281DRAFT_03767 0.56 -0.1 285,558 + -0.3 285,558 + -0.0 285,558 + -0.3 285,558 + -0.1 285,559 - -0.4 285,559 - +0.9 285,559 - +0.3 285,559 - -0.4 285,559 - +0.3 285,560 + +0.5 285,705 + -0.7 285,706 - +0.0 285,810 + +0.1 285,810 + +0.6 285,810 + +0.2 285,837 + H281DRAFT_03768 0.10 -0.0 286,206 + H281DRAFT_03768 0.40 -0.7 286,207 - H281DRAFT_03768 0.40 +0.1 286,207 - H281DRAFT_03768 0.40 +0.7 286,258 - H281DRAFT_03768 0.45 -0.0 286,266 + H281DRAFT_03768 0.45 -0.1 286,267 - H281DRAFT_03768 0.45 +0.6 286,442 + H281DRAFT_03768 0.60 +0.5 286,537 + H281DRAFT_03768 0.67 +0.2 286,537 + H281DRAFT_03768 0.67 +0.1 286,819 - -0.2 287,027 - +0.1 287,146 - H281DRAFT_03769 0.20 -0.5 287,477 - H281DRAFT_03769 0.73 -0.4 287,507 - H281DRAFT_03769 0.78 -0.3 287,689 - -0.2 287,699 + -0.9 287,822 + -0.0 287,822 + +0.5 287,823 - +0.4 287,823 - +0.3 287,823 - +0.4
Or see this region's nucleotide sequence