Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03689 and H281DRAFT_03690 are separated by 147 nucleotides H281DRAFT_03690 and H281DRAFT_03691 are separated by 65 nucleotides H281DRAFT_03691 and H281DRAFT_03692 are separated by 179 nucleotides
H281DRAFT_03689: H281DRAFT_03689 - Ribosomal protein S18 acetylase RimI, at 203,027 to 203,554
_03689
H281DRAFT_03690: H281DRAFT_03690 - Uncharacterized conserved protein, at 203,702 to 204,151
_03690
H281DRAFT_03691: H281DRAFT_03691 - transcriptional regulator, AraC family, at 204,217 to 205,050
_03691
H281DRAFT_03692: H281DRAFT_03692 - drug resistance transporter, EmrB/QacA subfamily, at 205,230 to 206,741
_03692
Position (kb) 204
205
206 Strain fitness (log2 ratio) -2
-1
0
1 at 203.291 kb on + strand, within H281DRAFT_03689 at 203.291 kb on + strand, within H281DRAFT_03689 at 203.295 kb on + strand, within H281DRAFT_03689 at 203.296 kb on - strand, within H281DRAFT_03689 at 203.296 kb on - strand, within H281DRAFT_03689 at 203.296 kb on - strand, within H281DRAFT_03689 at 203.296 kb on - strand, within H281DRAFT_03689 at 203.311 kb on - strand, within H281DRAFT_03689 at 203.340 kb on + strand, within H281DRAFT_03689 at 203.478 kb on + strand, within H281DRAFT_03689 at 203.479 kb on - strand, within H281DRAFT_03689 at 203.609 kb on + strand at 203.609 kb on + strand at 203.610 kb on - strand at 203.610 kb on - strand at 203.656 kb on - strand at 203.656 kb on - strand at 203.656 kb on - strand at 203.703 kb on + strand at 203.706 kb on + strand at 203.801 kb on + strand, within H281DRAFT_03690 at 203.802 kb on - strand, within H281DRAFT_03690 at 203.887 kb on - strand, within H281DRAFT_03690 at 203.954 kb on + strand, within H281DRAFT_03690 at 203.954 kb on + strand, within H281DRAFT_03690 at 204.037 kb on + strand, within H281DRAFT_03690 at 204.037 kb on + strand, within H281DRAFT_03690 at 204.037 kb on + strand, within H281DRAFT_03690 at 204.038 kb on - strand, within H281DRAFT_03690 at 204.038 kb on - strand, within H281DRAFT_03690 at 204.213 kb on + strand at 204.213 kb on + strand at 204.214 kb on - strand at 204.214 kb on - strand at 204.214 kb on - strand at 204.238 kb on + strand at 204.238 kb on + strand at 204.239 kb on - strand at 204.239 kb on - strand at 204.615 kb on + strand, within H281DRAFT_03691 at 204.615 kb on + strand, within H281DRAFT_03691 at 204.616 kb on - strand, within H281DRAFT_03691 at 204.841 kb on + strand, within H281DRAFT_03691 at 204.842 kb on - strand, within H281DRAFT_03691 at 205.051 kb on - strand at 205.313 kb on + strand at 205.319 kb on + strand at 205.320 kb on - strand at 205.320 kb on - strand at 205.320 kb on - strand at 205.498 kb on - strand, within H281DRAFT_03692 at 205.535 kb on + strand, within H281DRAFT_03692 at 205.868 kb on - strand, within H281DRAFT_03692 at 205.943 kb on + strand, within H281DRAFT_03692
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 203,291 + H281DRAFT_03689 0.50 +0.1 203,291 + H281DRAFT_03689 0.50 -0.6 203,295 + H281DRAFT_03689 0.51 +0.1 203,296 - H281DRAFT_03689 0.51 +0.4 203,296 - H281DRAFT_03689 0.51 +0.0 203,296 - H281DRAFT_03689 0.51 +0.1 203,296 - H281DRAFT_03689 0.51 +0.1 203,311 - H281DRAFT_03689 0.54 +0.7 203,340 + H281DRAFT_03689 0.59 -1.4 203,478 + H281DRAFT_03689 0.85 -0.7 203,479 - H281DRAFT_03689 0.86 +1.1 203,609 + +0.7 203,609 + -0.0 203,610 - +0.5 203,610 - +0.7 203,656 - +0.5 203,656 - -0.1 203,656 - +0.1 203,703 + -0.8 203,706 + -0.3 203,801 + H281DRAFT_03690 0.22 -0.1 203,802 - H281DRAFT_03690 0.22 +0.9 203,887 - H281DRAFT_03690 0.41 +1.3 203,954 + H281DRAFT_03690 0.56 +0.0 203,954 + H281DRAFT_03690 0.56 +0.4 204,037 + H281DRAFT_03690 0.74 -0.2 204,037 + H281DRAFT_03690 0.74 +0.7 204,037 + H281DRAFT_03690 0.74 -0.1 204,038 - H281DRAFT_03690 0.75 -0.1 204,038 - H281DRAFT_03690 0.75 +0.3 204,213 + -2.0 204,213 + -0.1 204,214 - -0.1 204,214 - -0.2 204,214 - +0.1 204,238 + -0.3 204,238 + +0.5 204,239 - +0.2 204,239 - +0.3 204,615 + H281DRAFT_03691 0.48 +0.0 204,615 + H281DRAFT_03691 0.48 -0.8 204,616 - H281DRAFT_03691 0.48 -0.1 204,841 + H281DRAFT_03691 0.75 +0.2 204,842 - H281DRAFT_03691 0.75 -0.5 205,051 - +0.8 205,313 + +0.1 205,319 + -0.0 205,320 - -0.7 205,320 - -0.1 205,320 - +0.2 205,498 - H281DRAFT_03692 0.18 +0.3 205,535 + H281DRAFT_03692 0.20 +0.6 205,868 - H281DRAFT_03692 0.42 +0.2 205,943 + H281DRAFT_03692 0.47 -0.0
Or see this region's nucleotide sequence