Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02904 and H281DRAFT_02905 overlap by 4 nucleotides H281DRAFT_02905 and H281DRAFT_02906 are separated by 141 nucleotides
H281DRAFT_02904: H281DRAFT_02904 - L-lactate dehydrogenase complex protein LldF, at 512,207 to 513,598
_02904
H281DRAFT_02905: H281DRAFT_02905 - L-lactate dehydrogenase complex protein LldE, at 513,595 to 514,338
_02905
H281DRAFT_02906: H281DRAFT_02906 - transcriptional regulator, GntR family, at 514,480 to 515,208
_02906
Position (kb) 513
514
515 Strain fitness (log2 ratio) -1
0
1 at 512.615 kb on - strand, within H281DRAFT_02904 at 512.622 kb on + strand, within H281DRAFT_02904 at 512.623 kb on - strand, within H281DRAFT_02904 at 512.796 kb on + strand, within H281DRAFT_02904 at 513.035 kb on - strand, within H281DRAFT_02904 at 513.035 kb on - strand, within H281DRAFT_02904 at 513.060 kb on + strand, within H281DRAFT_02904 at 513.061 kb on - strand, within H281DRAFT_02904 at 513.073 kb on + strand, within H281DRAFT_02904 at 513.217 kb on + strand, within H281DRAFT_02904 at 513.317 kb on - strand, within H281DRAFT_02904 at 513.317 kb on - strand, within H281DRAFT_02904 at 513.317 kb on - strand, within H281DRAFT_02904 at 513.317 kb on - strand, within H281DRAFT_02904 at 513.320 kb on + strand, within H281DRAFT_02904 at 513.320 kb on + strand, within H281DRAFT_02904 at 513.627 kb on + strand at 514.128 kb on - strand, within H281DRAFT_02905 at 514.426 kb on + strand at 514.584 kb on - strand, within H281DRAFT_02906 at 514.859 kb on + strand, within H281DRAFT_02906 at 514.861 kb on + strand, within H281DRAFT_02906 at 514.862 kb on - strand, within H281DRAFT_02906 at 514.862 kb on - strand, within H281DRAFT_02906 at 515.012 kb on + strand, within H281DRAFT_02906 at 515.276 kb on + strand at 515.296 kb on - strand at 515.298 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 512,615 - H281DRAFT_02904 0.29 -0.1 512,622 + H281DRAFT_02904 0.30 +0.3 512,623 - H281DRAFT_02904 0.30 -0.2 512,796 + H281DRAFT_02904 0.42 -0.6 513,035 - H281DRAFT_02904 0.59 +0.6 513,035 - H281DRAFT_02904 0.59 +0.2 513,060 + H281DRAFT_02904 0.61 -0.2 513,061 - H281DRAFT_02904 0.61 +0.7 513,073 + H281DRAFT_02904 0.62 +0.6 513,217 + H281DRAFT_02904 0.73 -0.8 513,317 - H281DRAFT_02904 0.80 -0.4 513,317 - H281DRAFT_02904 0.80 -0.5 513,317 - H281DRAFT_02904 0.80 +0.4 513,317 - H281DRAFT_02904 0.80 +0.6 513,320 + H281DRAFT_02904 0.80 -0.4 513,320 + H281DRAFT_02904 0.80 -0.2 513,627 + +0.2 514,128 - H281DRAFT_02905 0.72 +0.4 514,426 + -0.2 514,584 - H281DRAFT_02906 0.14 -1.1 514,859 + H281DRAFT_02906 0.52 +0.0 514,861 + H281DRAFT_02906 0.52 -0.1 514,862 - H281DRAFT_02906 0.52 +0.5 514,862 - H281DRAFT_02906 0.52 +0.3 515,012 + H281DRAFT_02906 0.73 -0.9 515,276 + -0.3 515,296 - -1.2 515,298 - -0.1
Or see this region's nucleotide sequence