Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02447 and H281DRAFT_02448 are separated by 185 nucleotides H281DRAFT_02448 and H281DRAFT_02449 are separated by 328 nucleotides H281DRAFT_02449 and H281DRAFT_02450 are separated by 465 nucleotides
H281DRAFT_02447: H281DRAFT_02447 - Short-chain dehydrogenase, at 12,057 to 13,073
_02447
H281DRAFT_02448: H281DRAFT_02448 - Predicted periplasmic or secreted lipoprotein, at 13,259 to 13,627
_02448
H281DRAFT_02449: H281DRAFT_02449 - hypothetical protein, at 13,956 to 14,273
_02449
H281DRAFT_02450: H281DRAFT_02450 - glycine betaine/proline transport system ATP-binding protein, at 14,739 to 15,920
_02450
Position (kb) 13
14
15 Strain fitness (log2 ratio) -2
-1
0
1 at 13.070 kb on - strand at 13.108 kb on + strand at 13.171 kb on + strand at 13.234 kb on + strand at 13.560 kb on + strand, within H281DRAFT_02448 at 13.836 kb on - strand at 13.851 kb on - strand at 13.917 kb on - strand at 13.940 kb on + strand at 13.941 kb on - strand at 14.118 kb on - strand, within H281DRAFT_02449 at 14.163 kb on - strand, within H281DRAFT_02449 at 14.271 kb on + strand at 14.278 kb on + strand at 14.418 kb on + strand at 14.478 kb on - strand at 14.643 kb on + strand at 14.643 kb on + strand at 14.647 kb on + strand at 14.647 kb on + strand at 14.648 kb on - strand at 14.648 kb on - strand at 14.648 kb on - strand at 14.725 kb on + strand at 14.726 kb on - strand at 14.881 kb on + strand, within H281DRAFT_02450 at 14.881 kb on + strand, within H281DRAFT_02450 at 14.881 kb on + strand, within H281DRAFT_02450
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 13,070 - +0.2 13,108 + -1.4 13,171 + +0.2 13,234 + -0.5 13,560 + H281DRAFT_02448 0.82 -0.6 13,836 - +0.2 13,851 - -0.1 13,917 - -0.1 13,940 + -0.0 13,941 - -0.1 14,118 - H281DRAFT_02449 0.51 +0.7 14,163 - H281DRAFT_02449 0.65 +0.1 14,271 + +0.5 14,278 + +0.3 14,418 + -0.9 14,478 - -0.2 14,643 + +0.2 14,643 + +0.2 14,647 + -0.8 14,647 + -1.3 14,648 - -0.2 14,648 - -0.1 14,648 - -0.9 14,725 + +0.1 14,726 - -0.1 14,881 + H281DRAFT_02450 0.12 +0.3 14,881 + H281DRAFT_02450 0.12 -0.2 14,881 + H281DRAFT_02450 0.12 -1.8
Or see this region's nucleotide sequence