Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02349 and H281DRAFT_02350 overlap by 23 nucleotides H281DRAFT_02350 and H281DRAFT_02351 are separated by 1 nucleotides H281DRAFT_02351 and H281DRAFT_02352 are separated by 98 nucleotides H281DRAFT_02352 and H281DRAFT_02353 are separated by 148 nucleotides
H281DRAFT_02349: H281DRAFT_02349 - general secretion pathway protein J, at 507,968 to 508,645
_02349
H281DRAFT_02350: H281DRAFT_02350 - general secretion pathway protein I, at 508,623 to 509,036
_02350
H281DRAFT_02351: H281DRAFT_02351 - general secretion pathway protein H, at 509,038 to 509,520
_02351
H281DRAFT_02352: H281DRAFT_02352 - general secretion pathway protein G, at 509,619 to 510,083
_02352
H281DRAFT_02353: H281DRAFT_02353 - general secretion pathway protein C, at 510,232 to 510,654
_02353
Position (kb)
509
510 Strain fitness (log2 ratio)
-1
0
1 at 508.158 kb on + strand, within H281DRAFT_02349 at 508.158 kb on + strand, within H281DRAFT_02349 at 508.244 kb on + strand, within H281DRAFT_02349 at 508.349 kb on + strand, within H281DRAFT_02349 at 508.349 kb on + strand, within H281DRAFT_02349 at 508.349 kb on + strand, within H281DRAFT_02349 at 508.350 kb on - strand, within H281DRAFT_02349 at 508.823 kb on + strand at 508.823 kb on + strand, within H281DRAFT_02350 at 508.823 kb on + strand, within H281DRAFT_02350 at 508.823 kb on + strand at 508.824 kb on - strand, within H281DRAFT_02350 at 508.824 kb on - strand, within H281DRAFT_02350 at 508.824 kb on - strand, within H281DRAFT_02350 at 508.911 kb on + strand, within H281DRAFT_02350 at 509.143 kb on + strand, within H281DRAFT_02351 at 509.144 kb on - strand, within H281DRAFT_02351 at 509.144 kb on - strand, within H281DRAFT_02351 at 509.620 kb on + strand at 509.728 kb on + strand, within H281DRAFT_02352 at 509.872 kb on + strand, within H281DRAFT_02352 at 510.017 kb on + strand, within H281DRAFT_02352 at 510.017 kb on + strand, within H281DRAFT_02352 at 510.083 kb on + strand at 510.083 kb on + strand at 510.084 kb on - strand at 510.084 kb on - strand at 510.092 kb on - strand at 510.175 kb on + strand at 510.175 kb on + strand at 510.175 kb on + strand at 510.176 kb on - strand at 510.176 kb on - strand at 510.176 kb on - strand at 510.221 kb on + strand at 510.221 kb on + strand at 510.221 kb on + strand at 510.222 kb on - strand at 510.222 kb on - strand at 510.228 kb on + strand at 510.228 kb on + strand at 510.229 kb on - strand at 510.229 kb on - strand at 510.229 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 508,158 + H281DRAFT_02349 0.28 +0.1 508,158 + H281DRAFT_02349 0.28 +0.1 508,244 + H281DRAFT_02349 0.41 -1.1 508,349 + H281DRAFT_02349 0.56 -0.3 508,349 + H281DRAFT_02349 0.56 -0.0 508,349 + H281DRAFT_02349 0.56 -0.5 508,350 - H281DRAFT_02349 0.56 -0.6 508,823 + -0.3 508,823 + H281DRAFT_02350 0.48 +0.3 508,823 + H281DRAFT_02350 0.48 +0.2 508,823 + +0.2 508,824 - H281DRAFT_02350 0.49 -0.7 508,824 - H281DRAFT_02350 0.49 -0.6 508,824 - H281DRAFT_02350 0.49 -0.2 508,911 + H281DRAFT_02350 0.70 -0.7 509,143 + H281DRAFT_02351 0.22 -0.6 509,144 - H281DRAFT_02351 0.22 +0.2 509,144 - H281DRAFT_02351 0.22 -1.1 509,620 + -0.2 509,728 + H281DRAFT_02352 0.23 -1.2 509,872 + H281DRAFT_02352 0.54 -0.1 510,017 + H281DRAFT_02352 0.86 -0.2 510,017 + H281DRAFT_02352 0.86 -0.2 510,083 + -0.6 510,083 + +0.1 510,084 - -1.2 510,084 - -0.5 510,092 - -1.1 510,175 + +0.5 510,175 + -0.3 510,175 + -1.1 510,176 - -0.4 510,176 - -0.1 510,176 - +1.6 510,221 + -0.4 510,221 + -0.6 510,221 + -0.1 510,222 - +0.4 510,222 - +1.4 510,228 + -0.5 510,228 + -0.7 510,229 - +0.3 510,229 - +0.3 510,229 - +0.1
Or see this region's nucleotide sequence