Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02338 and H281DRAFT_02339 are separated by 302 nucleotides H281DRAFT_02339 and H281DRAFT_02340 are separated by 226 nucleotides H281DRAFT_02340 and H281DRAFT_02341 are separated by 17 nucleotides
H281DRAFT_02338: H281DRAFT_02338 - DNA-3-methyladenine glycosylase II, at 495,559 to 496,476
_02338
H281DRAFT_02339: H281DRAFT_02339 - glutamate-cysteine ligase, at 496,779 to 498,425
_02339
H281DRAFT_02340: H281DRAFT_02340 - hypothetical protein, at 498,652 to 499,167
_02340
H281DRAFT_02341: H281DRAFT_02341 - MFS transporter, DHA2 family, multidrug resistance protein, at 499,185 to 500,771
_02341
Position (kb) 496
497
498
499 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 495.953 kb on + strand, within H281DRAFT_02338 at 495.954 kb on - strand, within H281DRAFT_02338 at 495.954 kb on - strand, within H281DRAFT_02338 at 496.181 kb on + strand, within H281DRAFT_02338 at 496.182 kb on - strand, within H281DRAFT_02338 at 496.229 kb on + strand, within H281DRAFT_02338 at 496.229 kb on + strand, within H281DRAFT_02338 at 496.267 kb on + strand, within H281DRAFT_02338 at 496.268 kb on - strand, within H281DRAFT_02338 at 496.415 kb on - strand at 496.595 kb on + strand at 496.704 kb on + strand at 496.704 kb on + strand at 496.705 kb on - strand at 496.915 kb on + strand at 497.109 kb on + strand, within H281DRAFT_02339 at 497.109 kb on + strand, within H281DRAFT_02339 at 497.110 kb on - strand, within H281DRAFT_02339 at 497.110 kb on - strand, within H281DRAFT_02339 at 497.196 kb on + strand, within H281DRAFT_02339 at 497.196 kb on + strand, within H281DRAFT_02339 at 497.197 kb on - strand, within H281DRAFT_02339 at 497.197 kb on - strand, within H281DRAFT_02339 at 497.226 kb on + strand, within H281DRAFT_02339 at 497.226 kb on + strand, within H281DRAFT_02339 at 497.226 kb on + strand, within H281DRAFT_02339 at 497.227 kb on - strand, within H281DRAFT_02339 at 497.227 kb on - strand, within H281DRAFT_02339 at 497.227 kb on - strand, within H281DRAFT_02339 at 497.227 kb on - strand, within H281DRAFT_02339 at 497.227 kb on - strand, within H281DRAFT_02339 at 497.233 kb on - strand, within H281DRAFT_02339 at 497.293 kb on - strand, within H281DRAFT_02339 at 497.293 kb on - strand, within H281DRAFT_02339 at 497.298 kb on + strand, within H281DRAFT_02339 at 497.299 kb on - strand, within H281DRAFT_02339 at 497.299 kb on - strand at 497.382 kb on + strand, within H281DRAFT_02339 at 497.430 kb on + strand, within H281DRAFT_02339 at 497.430 kb on + strand, within H281DRAFT_02339 at 497.430 kb on + strand, within H281DRAFT_02339 at 497.430 kb on + strand, within H281DRAFT_02339 at 497.430 kb on + strand, within H281DRAFT_02339 at 497.430 kb on + strand, within H281DRAFT_02339 at 497.431 kb on - strand, within H281DRAFT_02339 at 497.431 kb on - strand, within H281DRAFT_02339 at 497.431 kb on - strand, within H281DRAFT_02339 at 497.486 kb on + strand, within H281DRAFT_02339 at 497.487 kb on - strand, within H281DRAFT_02339 at 497.487 kb on - strand, within H281DRAFT_02339 at 497.487 kb on - strand, within H281DRAFT_02339 at 497.487 kb on - strand, within H281DRAFT_02339 at 497.517 kb on + strand, within H281DRAFT_02339 at 497.598 kb on + strand, within H281DRAFT_02339 at 497.599 kb on - strand, within H281DRAFT_02339 at 497.661 kb on + strand, within H281DRAFT_02339 at 497.661 kb on + strand, within H281DRAFT_02339 at 497.676 kb on - strand, within H281DRAFT_02339 at 497.739 kb on + strand, within H281DRAFT_02339 at 497.739 kb on + strand, within H281DRAFT_02339 at 497.769 kb on + strand, within H281DRAFT_02339 at 497.769 kb on + strand, within H281DRAFT_02339 at 497.817 kb on + strand, within H281DRAFT_02339 at 497.817 kb on + strand, within H281DRAFT_02339 at 497.817 kb on + strand, within H281DRAFT_02339 at 497.898 kb on + strand, within H281DRAFT_02339 at 497.898 kb on + strand, within H281DRAFT_02339 at 497.899 kb on - strand, within H281DRAFT_02339 at 497.981 kb on - strand, within H281DRAFT_02339 at 498.061 kb on + strand, within H281DRAFT_02339 at 498.061 kb on + strand, within H281DRAFT_02339 at 498.062 kb on - strand, within H281DRAFT_02339 at 498.261 kb on + strand at 498.262 kb on - strand at 498.262 kb on - strand at 498.362 kb on - strand at 498.362 kb on - strand at 498.399 kb on + strand at 498.400 kb on - strand at 498.400 kb on - strand at 498.513 kb on + strand at 498.514 kb on - strand at 498.517 kb on + strand at 498.517 kb on + strand at 498.517 kb on + strand at 498.518 kb on - strand at 498.518 kb on - strand at 498.518 kb on - strand at 498.518 kb on - strand at 498.581 kb on + strand at 498.582 kb on - strand at 498.582 kb on - strand at 498.619 kb on + strand at 498.745 kb on - strand, within H281DRAFT_02340 at 498.753 kb on - strand, within H281DRAFT_02340 at 498.753 kb on - strand, within H281DRAFT_02340 at 498.753 kb on - strand, within H281DRAFT_02340 at 498.843 kb on + strand, within H281DRAFT_02340 at 499.033 kb on + strand, within H281DRAFT_02340 at 499.033 kb on + strand, within H281DRAFT_02340 at 499.034 kb on - strand, within H281DRAFT_02340 at 499.034 kb on - strand, within H281DRAFT_02340 at 499.034 kb on - strand, within H281DRAFT_02340 at 499.270 kb on - strand at 499.298 kb on + strand at 499.298 kb on + strand at 499.299 kb on - strand at 499.299 kb on - strand at 499.299 kb on - strand at 499.299 kb on - strand at 499.299 kb on - strand at 499.300 kb on + strand at 499.300 kb on + strand at 499.300 kb on + strand at 499.300 kb on + strand at 499.301 kb on - strand at 499.301 kb on - strand at 499.301 kb on - strand at 499.301 kb on - strand at 499.301 kb on - strand at 499.301 kb on - strand at 499.301 kb on - strand at 499.301 kb on - strand at 499.301 kb on - strand at 499.381 kb on + strand, within H281DRAFT_02341 at 499.381 kb on + strand, within H281DRAFT_02341 at 499.392 kb on - strand, within H281DRAFT_02341 at 499.403 kb on - strand, within H281DRAFT_02341
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 495,953 + H281DRAFT_02338 0.43 -0.7 495,954 - H281DRAFT_02338 0.43 -1.6 495,954 - H281DRAFT_02338 0.43 +0.2 496,181 + H281DRAFT_02338 0.68 -1.3 496,182 - H281DRAFT_02338 0.68 +0.8 496,229 + H281DRAFT_02338 0.73 +0.2 496,229 + H281DRAFT_02338 0.73 +0.1 496,267 + H281DRAFT_02338 0.77 +0.3 496,268 - H281DRAFT_02338 0.77 +0.6 496,415 - -0.1 496,595 + -0.1 496,704 + +0.8 496,704 + +0.2 496,705 - -0.4 496,915 + -0.7 497,109 + H281DRAFT_02339 0.20 -1.2 497,109 + H281DRAFT_02339 0.20 -1.0 497,110 - H281DRAFT_02339 0.20 -1.3 497,110 - H281DRAFT_02339 0.20 -2.7 497,196 + H281DRAFT_02339 0.25 -0.8 497,196 + H281DRAFT_02339 0.25 -0.2 497,197 - H281DRAFT_02339 0.25 -0.7 497,197 - H281DRAFT_02339 0.25 -0.8 497,226 + H281DRAFT_02339 0.27 -0.8 497,226 + H281DRAFT_02339 0.27 -1.1 497,226 + H281DRAFT_02339 0.27 -0.4 497,227 - H281DRAFT_02339 0.27 -1.1 497,227 - H281DRAFT_02339 0.27 -0.1 497,227 - H281DRAFT_02339 0.27 -2.0 497,227 - H281DRAFT_02339 0.27 -1.6 497,227 - H281DRAFT_02339 0.27 -0.1 497,233 - H281DRAFT_02339 0.28 +0.5 497,293 - H281DRAFT_02339 0.31 -3.6 497,293 - H281DRAFT_02339 0.31 -1.8 497,298 + H281DRAFT_02339 0.32 -2.3 497,299 - H281DRAFT_02339 0.32 -0.5 497,299 - +1.5 497,382 + H281DRAFT_02339 0.37 -0.6 497,430 + H281DRAFT_02339 0.40 -0.9 497,430 + H281DRAFT_02339 0.40 -1.8 497,430 + H281DRAFT_02339 0.40 -1.8 497,430 + H281DRAFT_02339 0.40 +0.9 497,430 + H281DRAFT_02339 0.40 -1.7 497,430 + H281DRAFT_02339 0.40 -1.7 497,431 - H281DRAFT_02339 0.40 -0.6 497,431 - H281DRAFT_02339 0.40 -0.6 497,431 - H281DRAFT_02339 0.40 -1.0 497,486 + H281DRAFT_02339 0.43 -0.9 497,487 - H281DRAFT_02339 0.43 -2.0 497,487 - H281DRAFT_02339 0.43 -0.9 497,487 - H281DRAFT_02339 0.43 +0.4 497,487 - H281DRAFT_02339 0.43 +0.1 497,517 + H281DRAFT_02339 0.45 -0.7 497,598 + H281DRAFT_02339 0.50 -2.1 497,599 - H281DRAFT_02339 0.50 -0.9 497,661 + H281DRAFT_02339 0.54 -2.0 497,661 + H281DRAFT_02339 0.54 -1.8 497,676 - H281DRAFT_02339 0.54 -1.3 497,739 + H281DRAFT_02339 0.58 -1.7 497,739 + H281DRAFT_02339 0.58 -0.7 497,769 + H281DRAFT_02339 0.60 -2.6 497,769 + H281DRAFT_02339 0.60 -0.7 497,817 + H281DRAFT_02339 0.63 -1.3 497,817 + H281DRAFT_02339 0.63 -1.4 497,817 + H281DRAFT_02339 0.63 -2.4 497,898 + H281DRAFT_02339 0.68 -0.9 497,898 + H281DRAFT_02339 0.68 -1.4 497,899 - H281DRAFT_02339 0.68 -0.7 497,981 - H281DRAFT_02339 0.73 -0.8 498,061 + H281DRAFT_02339 0.78 -0.3 498,061 + H281DRAFT_02339 0.78 -1.0 498,062 - H281DRAFT_02339 0.78 -0.9 498,261 + +0.3 498,262 - -0.6 498,262 - -1.4 498,362 - -0.9 498,362 - +0.5 498,399 + +0.2 498,400 - -0.6 498,400 - -0.2 498,513 + +0.1 498,514 - +0.3 498,517 + +0.0 498,517 + +0.2 498,517 + -0.1 498,518 - -0.1 498,518 - +0.4 498,518 - -0.6 498,518 - -1.1 498,581 + -0.5 498,582 - +0.4 498,582 - +0.4 498,619 + +0.3 498,745 - H281DRAFT_02340 0.18 -0.3 498,753 - H281DRAFT_02340 0.20 -0.5 498,753 - H281DRAFT_02340 0.20 +0.5 498,753 - H281DRAFT_02340 0.20 -0.3 498,843 + H281DRAFT_02340 0.37 -0.2 499,033 + H281DRAFT_02340 0.74 -0.2 499,033 + H281DRAFT_02340 0.74 +0.3 499,034 - H281DRAFT_02340 0.74 +0.6 499,034 - H281DRAFT_02340 0.74 +0.3 499,034 - H281DRAFT_02340 0.74 +0.0 499,270 - -0.4 499,298 + -1.6 499,298 + -0.1 499,299 - +0.0 499,299 - +0.3 499,299 - +0.3 499,299 - -0.4 499,299 - +0.2 499,300 + -0.3 499,300 + +0.2 499,300 + +1.0 499,300 + -0.5 499,301 - +0.3 499,301 - +0.0 499,301 - -0.3 499,301 - -0.2 499,301 - -0.6 499,301 - +0.0 499,301 - +0.2 499,301 - +0.0 499,301 - +0.3 499,381 + H281DRAFT_02341 0.12 +0.2 499,381 + H281DRAFT_02341 0.12 -0.1 499,392 - H281DRAFT_02341 0.13 -0.2 499,403 - H281DRAFT_02341 0.14 +0.2
Or see this region's nucleotide sequence