Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01720 and H281DRAFT_01721 are separated by 140 nucleotides H281DRAFT_01721 and H281DRAFT_01722 are separated by 57 nucleotides
H281DRAFT_01720: H281DRAFT_01720 - transcriptional regulator, LysR family, at 609,428 to 610,360
_01720
H281DRAFT_01721: H281DRAFT_01721 - zinc-binding alcohol dehydrogenase family protein, at 610,501 to 611,508
_01721
H281DRAFT_01722: H281DRAFT_01722 - Sugar lactone lactonase YvrE, at 611,566 to 612,798
_01722
Position (kb) 610
611
612 Strain fitness (log2 ratio) -1
0
1 at 609.597 kb on - strand, within H281DRAFT_01720 at 609.783 kb on + strand, within H281DRAFT_01720 at 609.784 kb on - strand, within H281DRAFT_01720 at 609.903 kb on + strand, within H281DRAFT_01720 at 610.159 kb on - strand, within H281DRAFT_01720 at 610.159 kb on - strand, within H281DRAFT_01720 at 610.349 kb on + strand at 610.394 kb on - strand at 610.412 kb on - strand at 610.481 kb on - strand at 610.485 kb on + strand at 610.516 kb on + strand at 610.517 kb on - strand at 610.517 kb on - strand at 610.518 kb on + strand at 610.518 kb on + strand at 610.613 kb on + strand, within H281DRAFT_01721 at 610.762 kb on + strand, within H281DRAFT_01721 at 611.506 kb on + strand at 611.874 kb on + strand, within H281DRAFT_01722 at 612.398 kb on - strand, within H281DRAFT_01722
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 609,597 - H281DRAFT_01720 0.18 +0.1 609,783 + H281DRAFT_01720 0.38 -0.0 609,784 - H281DRAFT_01720 0.38 -0.9 609,903 + H281DRAFT_01720 0.51 +1.0 610,159 - H281DRAFT_01720 0.78 +0.0 610,159 - H281DRAFT_01720 0.78 +0.4 610,349 + +0.7 610,394 - +0.1 610,412 - -0.1 610,481 - +0.9 610,485 + +0.2 610,516 + +0.4 610,517 - +0.0 610,517 - -0.3 610,518 + +0.6 610,518 + -0.1 610,613 + H281DRAFT_01721 0.11 +0.3 610,762 + H281DRAFT_01721 0.26 +1.4 611,506 + -0.5 611,874 + H281DRAFT_01722 0.25 +1.3 612,398 - H281DRAFT_01722 0.67 -0.1
Or see this region's nucleotide sequence