Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01706 and H281DRAFT_01707 are separated by 783 nucleotides H281DRAFT_01707 and H281DRAFT_01708 are separated by 69 nucleotides H281DRAFT_01708 and H281DRAFT_01709 are separated by 83 nucleotides
H281DRAFT_01706: H281DRAFT_01706 - transcriptional regulator, MarR family, at 591,419 to 591,901
_01706
H281DRAFT_01707: H281DRAFT_01707 - Alkyl sulfatase BDS1, metallo-beta-lactamase superfamily, at 592,685 to 594,790
_01707
H281DRAFT_01708: H281DRAFT_01708 - hypothetical protein, at 594,860 to 595,066
_01708
H281DRAFT_01709: H281DRAFT_01709 - hypothetical protein, at 595,150 to 595,962
_01709
Position (kb) 592
593
594
595 Strain fitness (log2 ratio) -1
0
1 at 591.774 kb on + strand, within H281DRAFT_01706 at 591.859 kb on + strand at 591.901 kb on + strand at 591.909 kb on - strand at 592.211 kb on - strand at 592.246 kb on - strand at 592.712 kb on + strand at 592.966 kb on + strand, within H281DRAFT_01707 at 593.023 kb on + strand, within H281DRAFT_01707 at 593.326 kb on - strand, within H281DRAFT_01707 at 593.554 kb on - strand, within H281DRAFT_01707 at 593.604 kb on - strand, within H281DRAFT_01707 at 593.853 kb on + strand, within H281DRAFT_01707 at 593.854 kb on - strand, within H281DRAFT_01707 at 593.854 kb on - strand, within H281DRAFT_01707 at 593.918 kb on + strand, within H281DRAFT_01707 at 594.332 kb on - strand, within H281DRAFT_01707 at 594.412 kb on + strand, within H281DRAFT_01707 at 594.825 kb on - strand at 595.093 kb on + strand at 595.329 kb on - strand, within H281DRAFT_01709 at 595.376 kb on + strand, within H281DRAFT_01709 at 595.377 kb on - strand, within H281DRAFT_01709 at 595.380 kb on + strand, within H281DRAFT_01709 at 595.380 kb on + strand, within H281DRAFT_01709 at 595.467 kb on - strand, within H281DRAFT_01709
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 591,774 + H281DRAFT_01706 0.73 +0.4 591,859 + +0.4 591,901 + +1.1 591,909 - +0.2 592,211 - -0.1 592,246 - +0.6 592,712 + +0.1 592,966 + H281DRAFT_01707 0.13 -0.1 593,023 + H281DRAFT_01707 0.16 +0.6 593,326 - H281DRAFT_01707 0.30 +0.1 593,554 - H281DRAFT_01707 0.41 +0.1 593,604 - H281DRAFT_01707 0.44 +0.6 593,853 + H281DRAFT_01707 0.55 +0.4 593,854 - H281DRAFT_01707 0.56 +0.6 593,854 - H281DRAFT_01707 0.56 -0.1 593,918 + H281DRAFT_01707 0.59 -0.9 594,332 - H281DRAFT_01707 0.78 +0.3 594,412 + H281DRAFT_01707 0.82 -0.2 594,825 - -0.4 595,093 + +1.1 595,329 - H281DRAFT_01709 0.22 +0.2 595,376 + H281DRAFT_01709 0.28 +0.6 595,377 - H281DRAFT_01709 0.28 +0.6 595,380 + H281DRAFT_01709 0.28 +0.3 595,380 + H281DRAFT_01709 0.28 +0.9 595,467 - H281DRAFT_01709 0.39 +0.5
Or see this region's nucleotide sequence