Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01703 and H281DRAFT_01704 are separated by 21 nucleotides H281DRAFT_01704 and H281DRAFT_01705 are separated by 69 nucleotides H281DRAFT_01705 and H281DRAFT_01706 are separated by 72 nucleotides
H281DRAFT_01703: H281DRAFT_01703 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 588,806 to 590,158
_01703
H281DRAFT_01704: H281DRAFT_01704 - hypothetical protein, at 590,180 to 590,284
_01704
H281DRAFT_01705: H281DRAFT_01705 - aliphatic nitrilase, at 590,354 to 591,346
_01705
H281DRAFT_01706: H281DRAFT_01706 - transcriptional regulator, MarR family, at 591,419 to 591,901
_01706
Position (kb) 590
591
592 Strain fitness (log2 ratio) -1
0
1 at 590.214 kb on + strand, within H281DRAFT_01704 at 590.215 kb on - strand, within H281DRAFT_01704 at 590.232 kb on + strand, within H281DRAFT_01704 at 590.232 kb on + strand, within H281DRAFT_01704 at 590.851 kb on + strand, within H281DRAFT_01705 at 590.852 kb on - strand, within H281DRAFT_01705 at 591.396 kb on + strand at 591.774 kb on + strand, within H281DRAFT_01706 at 591.859 kb on + strand at 591.901 kb on + strand at 591.909 kb on - strand at 592.211 kb on - strand at 592.246 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 590,214 + H281DRAFT_01704 0.32 +0.4 590,215 - H281DRAFT_01704 0.33 +0.1 590,232 + H281DRAFT_01704 0.50 -0.2 590,232 + H281DRAFT_01704 0.50 +0.3 590,851 + H281DRAFT_01705 0.50 -0.1 590,852 - H281DRAFT_01705 0.50 +1.4 591,396 + +0.1 591,774 + H281DRAFT_01706 0.73 +0.4 591,859 + +0.4 591,901 + +1.1 591,909 - +0.2 592,211 - -0.1 592,246 - +0.6
Or see this region's nucleotide sequence