Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00658 and H281DRAFT_00659 are separated by 118 nucleotides H281DRAFT_00659 and H281DRAFT_00660 are separated by 482 nucleotides H281DRAFT_00660 and H281DRAFT_00661 are separated by 178 nucleotides
H281DRAFT_00658: H281DRAFT_00658 - transcriptional regulator, IclR family, at 737,885 to 738,727
_00658
H281DRAFT_00659: H281DRAFT_00659 - hypothetical protein, at 738,846 to 739,112
_00659
H281DRAFT_00660: H281DRAFT_00660 - Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase, at 739,595 to 740,068
_00660
H281DRAFT_00661: H281DRAFT_00661 - AraC-type DNA-binding protein, at 740,247 to 741,158
_00661
Position (kb) 739
740
741 Strain fitness (log2 ratio) -1
0
1 at 738.741 kb on - strand at 738.775 kb on - strand at 738.903 kb on + strand, within H281DRAFT_00659 at 739.181 kb on + strand at 739.182 kb on - strand at 739.430 kb on + strand at 739.661 kb on + strand, within H281DRAFT_00660 at 739.661 kb on + strand, within H281DRAFT_00660 at 739.661 kb on + strand, within H281DRAFT_00660 at 739.662 kb on - strand, within H281DRAFT_00660 at 740.470 kb on + strand, within H281DRAFT_00661 at 740.487 kb on - strand, within H281DRAFT_00661 at 740.887 kb on + strand, within H281DRAFT_00661 at 740.887 kb on + strand, within H281DRAFT_00661 at 740.888 kb on - strand, within H281DRAFT_00661 at 740.892 kb on - strand, within H281DRAFT_00661 at 740.892 kb on - strand, within H281DRAFT_00661 at 740.977 kb on + strand, within H281DRAFT_00661 at 740.983 kb on + strand, within H281DRAFT_00661
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 738,741 - +0.2 738,775 - +0.2 738,903 + H281DRAFT_00659 0.21 +0.1 739,181 + -0.8 739,182 - +0.4 739,430 + -1.1 739,661 + H281DRAFT_00660 0.14 -0.0 739,661 + H281DRAFT_00660 0.14 +1.7 739,661 + H281DRAFT_00660 0.14 +1.2 739,662 - H281DRAFT_00660 0.14 -0.2 740,470 + H281DRAFT_00661 0.24 +0.1 740,487 - H281DRAFT_00661 0.26 +0.5 740,887 + H281DRAFT_00661 0.70 -0.1 740,887 + H281DRAFT_00661 0.70 -0.6 740,888 - H281DRAFT_00661 0.70 +0.0 740,892 - H281DRAFT_00661 0.71 +0.3 740,892 - H281DRAFT_00661 0.71 +0.4 740,977 + H281DRAFT_00661 0.80 -0.2 740,983 + H281DRAFT_00661 0.81 +0.7
Or see this region's nucleotide sequence