Experiment: p-Coumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00438 and H281DRAFT_00439 are separated by 95 nucleotides H281DRAFT_00439 and H281DRAFT_00440 are separated by 2 nucleotides H281DRAFT_00440 and H281DRAFT_00441 are separated by 97 nucleotides H281DRAFT_00441 and H281DRAFT_00442 are separated by 174 nucleotides
H281DRAFT_00438: H281DRAFT_00438 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, at 481,291 to 482,691
_00438
H281DRAFT_00439: H281DRAFT_00439 - Uncharacterized membrane protein, at 482,787 to 483,362
_00439
H281DRAFT_00440: H281DRAFT_00440 - hypothetical protein, at 483,365 to 484,171
_00440
H281DRAFT_00441: H281DRAFT_00441 - hypothetical protein, at 484,269 to 484,757
_00441
H281DRAFT_00442: H281DRAFT_00442 - MFS transporter, MHS family, proline/betaine transporter, at 484,932 to 486,401
_00442
Position (kb) 483
484
485 Strain fitness (log2 ratio) -1
0
1 at 482.545 kb on - strand, within H281DRAFT_00438 at 482.546 kb on + strand, within H281DRAFT_00438 at 482.547 kb on - strand, within H281DRAFT_00438 at 482.547 kb on - strand at 482.569 kb on - strand at 482.569 kb on - strand at 482.617 kb on + strand at 482.690 kb on - strand at 482.690 kb on - strand at 482.922 kb on + strand, within H281DRAFT_00439 at 482.922 kb on + strand, within H281DRAFT_00439 at 482.923 kb on - strand, within H281DRAFT_00439 at 482.940 kb on + strand, within H281DRAFT_00439 at 482.952 kb on + strand, within H281DRAFT_00439 at 483.142 kb on - strand, within H281DRAFT_00439 at 483.142 kb on - strand, within H281DRAFT_00439 at 483.587 kb on + strand, within H281DRAFT_00440 at 483.587 kb on + strand, within H281DRAFT_00440 at 483.587 kb on + strand, within H281DRAFT_00440 at 483.588 kb on - strand, within H281DRAFT_00440 at 483.588 kb on - strand, within H281DRAFT_00440 at 483.588 kb on - strand, within H281DRAFT_00440 at 483.588 kb on - strand, within H281DRAFT_00440 at 484.035 kb on - strand, within H281DRAFT_00440 at 484.460 kb on + strand, within H281DRAFT_00441 at 484.461 kb on - strand, within H281DRAFT_00441 at 484.493 kb on + strand, within H281DRAFT_00441 at 484.788 kb on + strand at 484.788 kb on + strand at 484.805 kb on + strand at 484.961 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) remove 482,545 - H281DRAFT_00438 0.90 +0.1 482,546 + H281DRAFT_00438 0.90 -0.3 482,547 - H281DRAFT_00438 0.90 -0.4 482,547 - -0.0 482,569 - +0.0 482,569 - -0.1 482,617 + +0.2 482,690 - +0.2 482,690 - -0.3 482,922 + H281DRAFT_00439 0.23 +0.2 482,922 + H281DRAFT_00439 0.23 -1.0 482,923 - H281DRAFT_00439 0.24 -0.1 482,940 + H281DRAFT_00439 0.27 -0.1 482,952 + H281DRAFT_00439 0.29 -0.5 483,142 - H281DRAFT_00439 0.62 -0.2 483,142 - H281DRAFT_00439 0.62 -0.2 483,587 + H281DRAFT_00440 0.28 +0.5 483,587 + H281DRAFT_00440 0.28 +1.3 483,587 + H281DRAFT_00440 0.28 +0.1 483,588 - H281DRAFT_00440 0.28 +0.6 483,588 - H281DRAFT_00440 0.28 +0.8 483,588 - H281DRAFT_00440 0.28 +0.1 483,588 - H281DRAFT_00440 0.28 +0.6 484,035 - H281DRAFT_00440 0.83 +0.4 484,460 + H281DRAFT_00441 0.39 -0.2 484,461 - H281DRAFT_00441 0.39 -0.8 484,493 + H281DRAFT_00441 0.46 +0.6 484,788 + -0.8 484,788 + +0.1 484,805 + -0.6 484,961 - +0.2
Or see this region's nucleotide sequence