Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03652

Experiment: PYE 0.5x 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C
3,810,941	+		CCNA_03651	0.74	+0.6
3,810,953	+		CCNA_03651	0.74	-1.4
3,810,961	-		CCNA_03651	0.75	-0.7
3,811,001	+		CCNA_03651	0.76	+3.2
3,811,031	-		CCNA_03651	0.77	-1.7
3,811,043	+		CCNA_03651	0.77	+0.2
3,811,096	-		CCNA_03651	0.79	-1.0
3,811,114	-		CCNA_03651	0.80	+1.6
3,811,114	-		CCNA_03651	0.80	+0.6
3,811,131	+		CCNA_03651	0.80	-1.9
3,811,149	+		CCNA_03651	0.81	-1.9
3,811,149	+		CCNA_03651	0.81	-0.9
3,811,248	-		CCNA_03651	0.84	-1.9
3,811,375	-		CCNA_03651	0.88	-2.0
3,811,418	-		CCNA_03651	0.90	-0.2
3,811,458	+				-1.2
3,811,466	-				-0.2
3,811,484	+				-1.7
3,811,484	+				-0.4
3,811,503	+				+0.6
3,811,554	+				-1.2
3,811,562	-				-0.2
3,811,562	-				+0.6
3,811,604	+				-0.0
3,811,805	+				-0.1
3,811,849	-				-0.3
3,811,850	+				+0.1
3,811,850	-				-0.4
3,811,854	-				+0.3
3,811,866	-				+0.3
3,811,884	-				+1.1
3,811,899	-				-1.7
3,811,923	+				+0.6
3,812,102	-				-1.2
3,812,132	+				-0.4
3,812,142	+				+0.2
3,812,166	-				+0.6
3,812,197	-				-1.2
3,812,375	-		CCNA_03652	0.15	-0.0
3,812,456	+		CCNA_03652	0.18	+0.1
3,812,456	+		CCNA_03652	0.18	-0.7
3,812,457	-		CCNA_03652	0.18	-1.2
3,812,461	+		CCNA_03652	0.18	-2.0
3,812,464	-		CCNA_03652	0.18	-2.6
3,812,524	-		CCNA_03652	0.19	-1.0
3,812,544	-				+0.6
3,812,567	+		CCNA_03652	0.21	-1.9
3,812,567	+		CCNA_03652	0.21	-0.1
3,812,681	+		CCNA_03652	0.24	-1.7
3,812,687	+		CCNA_03652	0.24	-0.4
3,812,766	-		CCNA_03652	0.26	-1.0
3,812,771	+		CCNA_03652	0.27	-2.7
3,812,771	+		CCNA_03652	0.27	-0.7
3,812,805	+		CCNA_03652	0.28	-0.9
3,812,805	+		CCNA_03652	0.28	-0.2
3,812,812	-		CCNA_03652	0.28	-0.5
3,812,813	-		CCNA_03652	0.28	-0.8
3,812,813	-		CCNA_03652	0.28	-0.4
3,812,819	-				-0.7
3,812,822	+		CCNA_03652	0.28	-1.4
3,812,830	-		CCNA_03652	0.28	+0.4
3,812,840	-		CCNA_03652	0.29	-0.6
3,812,882	-		CCNA_03652	0.30	-0.4
3,812,939	+		CCNA_03652	0.31	-2.0
3,812,990	-		CCNA_03652	0.33	-0.4
3,813,034	+		CCNA_03652	0.34	-0.4
3,813,044	+		CCNA_03652	0.35	-1.2
3,813,046	+		CCNA_03652	0.35	-0.8
3,813,054	-		CCNA_03652	0.35	+1.3
3,813,059	+		CCNA_03652	0.35	+0.6
3,813,067	-		CCNA_03652	0.35	+0.8
3,813,145	+		CCNA_03652	0.37	-0.7
3,813,208	-		CCNA_03652	0.39	-1.2
3,813,214	+		CCNA_03652	0.39	-0.9
3,813,249	+		CCNA_03652	0.40	-0.7
3,813,272	+		CCNA_03652	0.41	+0.6
3,813,292	+		CCNA_03652	0.42	+0.8
3,813,316	+		CCNA_03652	0.42	-1.6
3,813,316	+		CCNA_03652	0.42	-1.6
3,813,324	-		CCNA_03652	0.43	-0.4
3,813,324	-		CCNA_03652	0.43	-1.0
3,813,347	-		CCNA_03652	0.43	-0.4
3,813,364	-		CCNA_03652	0.44	-2.1
3,813,387	+		CCNA_03652	0.44	+0.2
3,813,388	+		CCNA_03652	0.44	-0.2
3,813,415	-		CCNA_03652	0.45	-0.7
3,813,417	+		CCNA_03652	0.45	-2.4
3,813,452	+		CCNA_03652	0.46	+0.4
3,813,452	+		CCNA_03652	0.46	-1.6
3,813,460	-		CCNA_03652	0.47	-2.3
3,813,460	-		CCNA_03652	0.47	-1.4
3,813,460	-		CCNA_03652	0.47	-0.7
3,813,460	-		CCNA_03652	0.47	-1.1
3,813,508	+		CCNA_03652	0.48	-2.8
3,813,598	+		CCNA_03652	0.51	-1.8
3,813,606	-		CCNA_03652	0.51	-1.4
3,813,606	-		CCNA_03652	0.51	-2.3
3,813,606	-		CCNA_03652	0.51	-0.7
3,813,674	-		CCNA_03652	0.53	+1.3
3,813,686	+		CCNA_03652	0.53	+0.1
3,813,686	+		CCNA_03652	0.53	-1.4
3,813,694	-		CCNA_03652	0.53	-0.0
3,813,733	-		CCNA_03652	0.54	-1.0
3,813,738	-		CCNA_03652	0.55	+0.1
3,813,779	-		CCNA_03652	0.56	-0.7
3,813,867	+		CCNA_03652	0.58	-0.1
3,813,875	-		CCNA_03652	0.59	-0.0
3,813,875	-		CCNA_03652	0.59	-1.6
3,813,875	-		CCNA_03652	0.59	+0.3
3,813,888	+		CCNA_03652	0.59	+0.6
3,813,893	+		CCNA_03652	0.59	-0.5
3,813,919	-		CCNA_03652	0.60	+0.8
3,813,939	+		CCNA_03652	0.60	-0.4
3,813,949	+		CCNA_03652	0.61	-1.2
3,814,015	+		CCNA_03652	0.63	-1.9
3,814,018	-		CCNA_03652	0.63	+1.6
3,814,344	-				-0.7
3,814,349	-		CCNA_03652	0.72	-0.4
3,814,349	-		CCNA_03652	0.72	-0.5
3,814,354	-		CCNA_03652	0.72	-1.6
3,814,370	+		CCNA_03652	0.73	-1.0
3,814,405	+		CCNA_03652	0.74	-1.4
3,814,431	-		CCNA_03652	0.75	-2.4
3,814,442	-		CCNA_03652	0.75	-1.9
3,814,442	-		CCNA_03652	0.75	+1.2
3,814,444	+		CCNA_03652	0.75	+0.2
3,814,444	+		CCNA_03652	0.75	-1.9
3,814,452	-		CCNA_03652	0.75	-0.0
3,814,616	+		CCNA_03652	0.80	+0.2
3,814,774	+		CCNA_03652	0.84	+0.2
3,814,774	+		CCNA_03652	0.84	-0.6
3,814,786	+		CCNA_03652	0.85	-0.5
3,814,947	+		CCNA_03652	0.89	-0.3
3,814,962	-		CCNA_03652	0.90	+0.2
3,814,962	-		CCNA_03652	0.90	-1.2
3,814,962	-		CCNA_03652	0.90	-0.4
3,814,964	-				-1.5
3,814,981	-				-0.3
3,814,983	+				-0.7
3,814,988	+				-0.4
3,814,991	-				+0.6
3,815,014	-				+2.4
3,815,038	+				-0.3
3,815,040	-				-0.4
3,815,044	+				-0.4
3,815,062	-				-0.9
3,815,170	-				-1.4
3,815,230	+				-0.2
3,815,235	+				-1.4
3,815,249	+				+0.3
3,815,249	+				-0.2
3,815,249	+				-0.4
3,815,249	+				-0.1
3,815,249	+				-0.4
3,815,249	+				-0.9
3,815,249	+				-1.3
3,815,257	-				-0.0
3,815,277	+				-0.7
3,815,285	+				-0.7
3,815,305	+				-0.8
3,815,305	+				+0.1
3,815,305	+				+0.3
3,815,312	-				-1.2
3,815,313	-				+0.3
3,815,336	+				+0.3
3,815,344	-				+0.1
3,815,378	-				-0.9
3,815,420	+				+0.6
3,815,425	+				-0.6
3,815,428	-				-0.6
3,815,770	+				+0.8
3,815,800	-				-0.7
3,815,860	+				+0.1
3,815,923	+				-1.8
3,815,936	-				+0.1
3,815,938	+				-0.2
3,816,004	+		CCNA_03910	0.23	+0.6
3,816,012	-		CCNA_03910	0.31	+0.2
3,816,069	+		CCNA_03910	0.83	+0.7
3,816,145	-				+0.0
3,816,155	-				-0.5
3,816,159	-				+0.0
3,816,169	+				+0.3
3,816,177	-				-0.4