Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04787

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04786 and H281DRAFT_04787 are separated by 371 nucleotidesH281DRAFT_04787 and H281DRAFT_04788 overlap by 1 nucleotides H281DRAFT_04786: H281DRAFT_04786 - Glycosyltransferase involved in cell wall bisynthesis, at 209,639 to 210,841 _04786 H281DRAFT_04787: H281DRAFT_04787 - polysaccharide transporter, PST family, at 211,213 to 212,466 _04787 H281DRAFT_04788: H281DRAFT_04788 - Glycosyltransferase involved in cell wall bisynthesis, at 212,466 to 213,539 _04788 Position (kb) 211 212 213Strain fitness (log2 ratio) -1 0 1 2at 210.240 kb on + strand, within H281DRAFT_04786at 210.241 kb on - strand, within H281DRAFT_04786at 210.434 kb on - strand, within H281DRAFT_04786at 210.552 kb on + strand, within H281DRAFT_04786at 210.730 kb on - strandat 210.841 kb on + strandat 210.978 kb on - strandat 211.003 kb on + strandat 211.004 kb on - strandat 211.732 kb on + strand, within H281DRAFT_04787at 212.275 kb on + strand, within H281DRAFT_04787at 212.439 kb on + strandat 212.578 kb on + strand, within H281DRAFT_04788at 212.791 kb on - strand, within H281DRAFT_04788at 212.791 kb on - strand, within H281DRAFT_04788

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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210,240 + H281DRAFT_04786 0.50 +1.1
210,241 - H281DRAFT_04786 0.50 +1.1
210,434 - H281DRAFT_04786 0.66 +1.7
210,552 + H281DRAFT_04786 0.76 +0.0
210,730 - +0.1
210,841 + -0.1
210,978 - -0.2
211,003 + +0.1
211,004 - -0.1
211,732 + H281DRAFT_04787 0.41 +0.5
212,275 + H281DRAFT_04787 0.85 +0.7
212,439 + +0.3
212,578 + H281DRAFT_04788 0.10 -0.6
212,791 - H281DRAFT_04788 0.30 -0.1
212,791 - H281DRAFT_04788 0.30 +1.9

Or see this region's nucleotide sequence