Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03438

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03437 and H281DRAFT_03438 are separated by 28 nucleotidesH281DRAFT_03438 and H281DRAFT_03439 are separated by 52 nucleotides H281DRAFT_03437: H281DRAFT_03437 - Glycosyltransferases involved in cell wall biogenesis, at 517,324 to 518,334 _03437 H281DRAFT_03438: H281DRAFT_03438 - polysaccharide transporter, PST family, at 518,363 to 519,679 _03438 H281DRAFT_03439: H281DRAFT_03439 - Glycosyltransferase involved in cell wall bisynthesis, at 519,732 to 520,919 _03439 Position (kb) 518 519 520Strain fitness (log2 ratio) -1 0 1at 517.369 kb on + strandat 517.374 kb on - strandat 517.478 kb on - strand, within H281DRAFT_03437at 517.564 kb on + strand, within H281DRAFT_03437at 518.193 kb on + strand, within H281DRAFT_03437at 518.424 kb on - strandat 518.429 kb on + strandat 518.763 kb on + strand, within H281DRAFT_03438at 518.932 kb on + strandat 519.054 kb on - strand, within H281DRAFT_03438at 519.156 kb on + strand, within H281DRAFT_03438at 519.256 kb on - strand, within H281DRAFT_03438at 519.399 kb on - strand, within H281DRAFT_03438at 519.403 kb on - strand, within H281DRAFT_03438at 519.712 kb on + strandat 519.933 kb on + strand, within H281DRAFT_03439at 519.934 kb on - strand, within H281DRAFT_03439at 519.992 kb on + strand, within H281DRAFT_03439at 520.164 kb on + strand, within H281DRAFT_03439at 520.165 kb on - strand, within H281DRAFT_03439at 520.359 kb on + strandat 520.360 kb on - strand, within H281DRAFT_03439at 520.450 kb on + strand, within H281DRAFT_03439

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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517,369 + +0.2
517,374 - +0.5
517,478 - H281DRAFT_03437 0.15 +0.2
517,564 + H281DRAFT_03437 0.24 +0.6
518,193 + H281DRAFT_03437 0.86 -0.7
518,424 - +0.6
518,429 + +0.2
518,763 + H281DRAFT_03438 0.30 +1.1
518,932 + +1.6
519,054 - H281DRAFT_03438 0.52 +0.6
519,156 + H281DRAFT_03438 0.60 +0.2
519,256 - H281DRAFT_03438 0.68 -0.0
519,399 - H281DRAFT_03438 0.79 +0.5
519,403 - H281DRAFT_03438 0.79 +0.2
519,712 + +0.1
519,933 + H281DRAFT_03439 0.17 +0.1
519,934 - H281DRAFT_03439 0.17 -0.2
519,992 + H281DRAFT_03439 0.22 -0.2
520,164 + H281DRAFT_03439 0.36 -0.1
520,165 - H281DRAFT_03439 0.36 +0.4
520,359 + +0.1
520,360 - H281DRAFT_03439 0.53 -0.4
520,450 + H281DRAFT_03439 0.60 +0.3

Or see this region's nucleotide sequence