Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02651

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02650 and H281DRAFT_02651 are separated by 86 nucleotidesH281DRAFT_02651 and H281DRAFT_02652 are separated by 133 nucleotides H281DRAFT_02650: H281DRAFT_02650 - Pimeloyl-ACP methyl ester carboxylesterase, at 231,387 to 232,295 _02650 H281DRAFT_02651: H281DRAFT_02651 - transcriptional regulator, MerR family, at 232,382 to 232,768 _02651 H281DRAFT_02652: H281DRAFT_02652 - Uncharacterized conserved protein, at 232,902 to 233,930 _02652 Position (kb) 232 233Strain fitness (log2 ratio) -1 0 1at 231.479 kb on - strand, within H281DRAFT_02650at 231.562 kb on + strand, within H281DRAFT_02650at 231.835 kb on + strand, within H281DRAFT_02650at 231.866 kb on - strand, within H281DRAFT_02650at 231.988 kb on + strand, within H281DRAFT_02650at 232.198 kb on + strand, within H281DRAFT_02650at 232.198 kb on + strand, within H281DRAFT_02650at 232.198 kb on + strand, within H281DRAFT_02650at 232.199 kb on - strand, within H281DRAFT_02650at 232.199 kb on - strand, within H281DRAFT_02650at 232.288 kb on - strandat 232.466 kb on + strand, within H281DRAFT_02651at 233.009 kb on + strandat 233.504 kb on + strand, within H281DRAFT_02652at 233.525 kb on - strand, within H281DRAFT_02652at 233.572 kb on + strand, within H281DRAFT_02652at 233.590 kb on + strand, within H281DRAFT_02652at 233.700 kb on - strand, within H281DRAFT_02652

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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231,479 - H281DRAFT_02650 0.10 +0.3
231,562 + H281DRAFT_02650 0.19 -0.3
231,835 + H281DRAFT_02650 0.49 -0.7
231,866 - H281DRAFT_02650 0.53 +0.2
231,988 + H281DRAFT_02650 0.66 +0.2
232,198 + H281DRAFT_02650 0.89 -1.1
232,198 + H281DRAFT_02650 0.89 -0.8
232,198 + H281DRAFT_02650 0.89 +0.9
232,199 - H281DRAFT_02650 0.89 +0.6
232,199 - H281DRAFT_02650 0.89 -0.9
232,288 - +1.1
232,466 + H281DRAFT_02651 0.22 +0.5
233,009 + +0.7
233,504 + H281DRAFT_02652 0.59 +0.2
233,525 - H281DRAFT_02652 0.61 +0.2
233,572 + H281DRAFT_02652 0.65 +1.3
233,590 + H281DRAFT_02652 0.67 +0.2
233,700 - H281DRAFT_02652 0.78 +0.3

Or see this region's nucleotide sequence