Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02442 and H281DRAFT_02443 are separated by 120 nucleotides H281DRAFT_02443 and H281DRAFT_02444 are separated by 6 nucleotides H281DRAFT_02444 and H281DRAFT_02445 are separated by 94 nucleotides
H281DRAFT_02442: H281DRAFT_02442 - NADH dehydrogenase subunit M, at 5,368 to 6,921
_02442
H281DRAFT_02443: H281DRAFT_02443 - alkylhydroperoxidase AhpD family core domain-containing protein, at 7,042 to 7,434
_02443
H281DRAFT_02444: H281DRAFT_02444 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 7,441 to 8,130
_02444
H281DRAFT_02445: H281DRAFT_02445 - cytochrome c peroxidase, at 8,225 to 9,676
_02445
Position (kb) 7
8 Strain fitness (log2 ratio) -1
0
1
2 at 6.051 kb on + strand, within H281DRAFT_02442 at 6.191 kb on + strand, within H281DRAFT_02442 at 6.195 kb on + strand, within H281DRAFT_02442 at 6.221 kb on - strand, within H281DRAFT_02442 at 6.289 kb on - strand, within H281DRAFT_02442 at 6.409 kb on + strand at 6.443 kb on - strand, within H281DRAFT_02442 at 6.910 kb on - strand at 6.979 kb on - strand at 7.067 kb on - strand at 7.252 kb on + strand, within H281DRAFT_02443 at 7.433 kb on - strand at 7.539 kb on + strand, within H281DRAFT_02444 at 7.539 kb on + strand, within H281DRAFT_02444 at 7.627 kb on - strand, within H281DRAFT_02444 at 7.838 kb on - strand, within H281DRAFT_02444 at 8.051 kb on - strand, within H281DRAFT_02444 at 8.168 kb on + strand at 8.168 kb on + strand at 8.275 kb on + strand at 8.351 kb on + strand at 8.352 kb on - strand at 8.352 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 6,051 + H281DRAFT_02442 0.44 +0.3 6,191 + H281DRAFT_02442 0.53 +0.3 6,195 + H281DRAFT_02442 0.53 +0.7 6,221 - H281DRAFT_02442 0.55 +0.1 6,289 - H281DRAFT_02442 0.59 +0.3 6,409 + +2.1 6,443 - H281DRAFT_02442 0.69 +0.1 6,910 - +0.1 6,979 - -1.3 7,067 - +0.7 7,252 + H281DRAFT_02443 0.53 -0.7 7,433 - -0.1 7,539 + H281DRAFT_02444 0.14 +0.2 7,539 + H281DRAFT_02444 0.14 +0.2 7,627 - H281DRAFT_02444 0.27 +0.2 7,838 - H281DRAFT_02444 0.58 -0.4 8,051 - H281DRAFT_02444 0.88 -0.2 8,168 + -0.0 8,168 + +0.0 8,275 + -0.1 8,351 + -0.1 8,352 - -0.3 8,352 - -0.6
Or see this region's nucleotide sequence