Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01023 and H281DRAFT_01024 are separated by 298 nucleotides H281DRAFT_01024 and H281DRAFT_01025 are separated by 39 nucleotides
H281DRAFT_01023: H281DRAFT_01023 - filamentous hemagglutinin family N-terminal domain-containing protein, at 1,147,698 to 1,149,947
_01023
H281DRAFT_01024: H281DRAFT_01024 - hypothetical protein, at 1,150,246 to 1,150,554
_01024
H281DRAFT_01025: H281DRAFT_01025 - transcriptional regulator, MarR family, at 1,150,594 to 1,151,043
_01025
Position (kb)
1150
1151
1152 Strain fitness (log2 ratio)
-1
0
1 at 1150.037 kb on + strand at 1150.037 kb on + strand at 1150.154 kb on - strand at 1150.306 kb on + strand, within H281DRAFT_01024 at 1150.307 kb on - strand, within H281DRAFT_01024 at 1150.990 kb on + strand, within H281DRAFT_01025 at 1151.135 kb on - strand at 1151.187 kb on - strand at 1151.263 kb on - strand at 1151.394 kb on + strand at 1151.395 kb on - strand at 1151.465 kb on + strand at 1151.465 kb on + strand at 1151.465 kb on + strand at 1151.563 kb on - strand at 1151.566 kb on + strand at 1151.639 kb on - strand at 1151.699 kb on - strand at 1151.699 kb on - strand at 1151.829 kb on + strand at 1151.830 kb on - strand at 1151.833 kb on + strand at 1151.834 kb on - strand at 1151.947 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 1,150,037 + -0.3 1,150,037 + -0.7 1,150,154 - +0.6 1,150,306 + H281DRAFT_01024 0.19 +0.2 1,150,307 - H281DRAFT_01024 0.20 -1.4 1,150,990 + H281DRAFT_01025 0.88 -0.5 1,151,135 - +1.3 1,151,187 - -0.1 1,151,263 - +0.1 1,151,394 + +0.4 1,151,395 - +0.7 1,151,465 + +1.3 1,151,465 + +0.2 1,151,465 + +0.3 1,151,563 - +0.0 1,151,566 + +0.9 1,151,639 - -0.1 1,151,699 - +0.5 1,151,699 - +0.9 1,151,829 + +0.0 1,151,830 - -0.1 1,151,833 + +0.6 1,151,834 - -1.5 1,151,947 - +0.7
Or see this region's nucleotide sequence