Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00325 and H281DRAFT_00326 are separated by 493 nucleotides H281DRAFT_00326 and H281DRAFT_00327 are separated by 140 nucleotides H281DRAFT_00327 and H281DRAFT_00328 are separated by 87 nucleotides
H281DRAFT_00325: H281DRAFT_00325 - GAF modulated sigma54 specific transcriptional regulator, Fis family, at 354,608 to 356,581
_00325
H281DRAFT_00326: H281DRAFT_00326 - pyrroloquinoline quinone biosynthesis protein D, at 357,075 to 357,356
_00326
H281DRAFT_00327: H281DRAFT_00327 - amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-), at 357,497 to 358,747
_00327
H281DRAFT_00328: H281DRAFT_00328 - alcohol dehydrogenase (cytochrome c), at 358,835 to 360,562
_00328
Position (kb)
357
358
359 Strain fitness (log2 ratio)
-2
-1
0
1 at 356.525 kb on - strand at 356.532 kb on - strand at 356.803 kb on - strand at 356.845 kb on - strand at 356.883 kb on - strand at 356.918 kb on + strand at 356.918 kb on + strand at 356.919 kb on - strand at 356.919 kb on - strand at 356.919 kb on - strand at 356.919 kb on - strand at 356.921 kb on - strand at 356.934 kb on - strand at 357.003 kb on + strand at 357.013 kb on + strand at 357.224 kb on - strand, within H281DRAFT_00326 at 357.393 kb on - strand at 357.393 kb on - strand at 357.393 kb on - strand at 357.400 kb on - strand at 357.404 kb on + strand at 357.509 kb on - strand at 357.606 kb on + strand at 357.687 kb on + strand, within H281DRAFT_00327 at 357.688 kb on - strand, within H281DRAFT_00327 at 357.810 kb on + strand, within H281DRAFT_00327 at 357.810 kb on + strand, within H281DRAFT_00327 at 358.335 kb on + strand, within H281DRAFT_00327 at 358.336 kb on - strand at 358.402 kb on - strand, within H281DRAFT_00327 at 358.860 kb on + strand at 358.956 kb on + strand at 359.143 kb on - strand, within H281DRAFT_00328 at 359.259 kb on + strand, within H281DRAFT_00328 at 359.260 kb on - strand, within H281DRAFT_00328 at 359.311 kb on + strand, within H281DRAFT_00328 at 359.312 kb on - strand, within H281DRAFT_00328 at 359.312 kb on - strand, within H281DRAFT_00328 at 359.334 kb on + strand, within H281DRAFT_00328 at 359.335 kb on - strand, within H281DRAFT_00328 at 359.445 kb on + strand, within H281DRAFT_00328 at 359.485 kb on - strand at 359.523 kb on + strand, within H281DRAFT_00328 at 359.557 kb on - strand, within H281DRAFT_00328 at 359.571 kb on + strand, within H281DRAFT_00328 at 359.610 kb on + strand, within H281DRAFT_00328 at 359.611 kb on - strand, within H281DRAFT_00328 at 359.641 kb on - strand, within H281DRAFT_00328
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 356,525 - +0.6 356,532 - +0.2 356,803 - +0.6 356,845 - -0.3 356,883 - -0.3 356,918 + -0.2 356,918 + +0.1 356,919 - -0.5 356,919 - +1.5 356,919 - +0.5 356,919 - +1.4 356,921 - +0.4 356,934 - +0.6 357,003 + +0.0 357,013 + -0.1 357,224 - H281DRAFT_00326 0.53 -0.1 357,393 - +0.9 357,393 - -0.7 357,393 - -0.1 357,400 - +1.1 357,404 + +0.7 357,509 - -0.2 357,606 + +0.4 357,687 + H281DRAFT_00327 0.15 -0.4 357,688 - H281DRAFT_00327 0.15 -0.3 357,810 + H281DRAFT_00327 0.25 -1.7 357,810 + H281DRAFT_00327 0.25 -0.3 358,335 + H281DRAFT_00327 0.67 +0.1 358,336 - +1.2 358,402 - H281DRAFT_00327 0.72 -1.5 358,860 + +0.3 358,956 + +0.5 359,143 - H281DRAFT_00328 0.18 -0.1 359,259 + H281DRAFT_00328 0.25 +0.6 359,260 - H281DRAFT_00328 0.25 +0.3 359,311 + H281DRAFT_00328 0.28 +0.2 359,312 - H281DRAFT_00328 0.28 +0.3 359,312 - H281DRAFT_00328 0.28 -0.6 359,334 + H281DRAFT_00328 0.29 +0.2 359,335 - H281DRAFT_00328 0.29 -0.7 359,445 + H281DRAFT_00328 0.35 +0.7 359,485 - -1.8 359,523 + H281DRAFT_00328 0.40 -0.2 359,557 - H281DRAFT_00328 0.42 +0.0 359,571 + H281DRAFT_00328 0.43 +0.1 359,610 + H281DRAFT_00328 0.45 +0.5 359,611 - H281DRAFT_00328 0.45 -0.4 359,641 - H281DRAFT_00328 0.47 +0.5
Or see this region's nucleotide sequence