Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00115 and H281DRAFT_00116 overlap by 4 nucleotides H281DRAFT_00116 and H281DRAFT_00117 are separated by 124 nucleotides H281DRAFT_00117 and H281DRAFT_00118 are separated by 20 nucleotides
H281DRAFT_00115: H281DRAFT_00115 - Uncharacterized conserved protein, DUF934 family, at 123,261 to 123,809
_00115
H281DRAFT_00116: H281DRAFT_00116 - phosphoadenylylsulfate reductase (thioredoxin), at 123,806 to 124,558
_00116
H281DRAFT_00117: H281DRAFT_00117 - sulfate adenylyltransferase subunit 2, at 124,683 to 125,645
_00117
H281DRAFT_00118: H281DRAFT_00118 - sulfate adenylyltransferase subunit 1, at 125,666 to 126,979
_00118
Position (kb) 124
125
126 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 124.052 kb on + strand at 124.347 kb on - strand, within H281DRAFT_00116 at 124.616 kb on + strand at 124.617 kb on - strand at 124.944 kb on + strand, within H281DRAFT_00117 at 125.247 kb on + strand, within H281DRAFT_00117 at 125.248 kb on - strand, within H281DRAFT_00117 at 125.248 kb on - strand, within H281DRAFT_00117 at 125.248 kb on - strand, within H281DRAFT_00117 at 125.326 kb on - strand, within H281DRAFT_00117 at 125.362 kb on - strand, within H281DRAFT_00117 at 125.362 kb on - strand, within H281DRAFT_00117 at 125.624 kb on + strand at 125.625 kb on - strand at 125.672 kb on - strand at 125.763 kb on - strand at 125.893 kb on + strand, within H281DRAFT_00118 at 125.893 kb on + strand, within H281DRAFT_00118 at 125.909 kb on + strand, within H281DRAFT_00118 at 125.915 kb on + strand, within H281DRAFT_00118 at 125.972 kb on + strand at 126.162 kb on - strand, within H281DRAFT_00118 at 126.197 kb on + strand, within H281DRAFT_00118 at 126.197 kb on + strand, within H281DRAFT_00118 at 126.622 kb on + strand, within H281DRAFT_00118
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 124,052 + -1.0 124,347 - H281DRAFT_00116 0.72 -4.8 124,616 + -0.3 124,617 - -3.0 124,944 + H281DRAFT_00117 0.27 -3.3 125,247 + H281DRAFT_00117 0.59 -3.5 125,248 - H281DRAFT_00117 0.59 -2.9 125,248 - H281DRAFT_00117 0.59 -4.5 125,248 - H281DRAFT_00117 0.59 -3.9 125,326 - H281DRAFT_00117 0.67 -3.3 125,362 - H281DRAFT_00117 0.71 -4.0 125,362 - H281DRAFT_00117 0.71 -3.3 125,624 + -3.2 125,625 - -4.5 125,672 - -4.6 125,763 - -1.4 125,893 + H281DRAFT_00118 0.17 -2.8 125,893 + H281DRAFT_00118 0.17 -2.9 125,909 + H281DRAFT_00118 0.18 -2.3 125,915 + H281DRAFT_00118 0.19 -2.1 125,972 + -1.4 126,162 - H281DRAFT_00118 0.38 -3.1 126,197 + H281DRAFT_00118 0.40 -3.7 126,197 + H281DRAFT_00118 0.40 -1.6 126,622 + H281DRAFT_00118 0.73 -1.7
Or see this region's nucleotide sequence