Strain Fitness in Marinobacter adhaerens HP15 around HP15_514

Experiment: D-Alanine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_512 and HP15_513 overlap by 1 nucleotidesHP15_513 and HP15_514 are separated by 5 nucleotidesHP15_514 and HP15_515 are separated by 18 nucleotides HP15_512: HP15_512 - isoleucyl-tRNA synthetase, at 524,370 to 527,189 _512 HP15_513: HP15_513 - lipoprotein signal peptidase, at 527,189 to 527,713 _513 HP15_514: HP15_514 - peptidylprolyl isomerase, FKBP-type, at 527,719 to 528,171 _514 HP15_515: HP15_515 - hydroxymethylbutenyl pyrophosphate reductase, at 528,190 to 529,143 _515 Position (kb) 527 528 529Strain fitness (log2 ratio) -1 0 1at 527.927 kb on + strand, within HP15_514at 529.138 kb on + strandat 529.138 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Alanine
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527,927 + HP15_514 0.46 -0.9
529,138 + -0.3
529,138 + +0.0

Or see this region's nucleotide sequence