Experiment: m.b. Aluminum chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_262p01700 and PGA1_262p01710 are separated by 15 nucleotides PGA1_262p01710 and PGA1_262p01720 are separated by 12 nucleotides PGA1_262p01720 and PGA1_262p01730 overlap by 4 nucleotides
PGA1_262p01700: PGA1_262p01700 - putative ABC transporter, solute-binding protein, at 186,439 to 187,989
_262p01700
PGA1_262p01710: PGA1_262p01710 - putative glutathione transport system permease protein, at 188,005 to 188,943
_262p01710
PGA1_262p01720: PGA1_262p01720 - putative glutathione transport system permease protein, at 188,956 to 189,834
_262p01720
PGA1_262p01730: PGA1_262p01730 - putative glutathione import ATP-binding protein, at 189,831 to 190,808
_262p01730
Position (kb) 188
189 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 187.195 kb on - strand, within PGA1_262p01700 at 187.534 kb on - strand, within PGA1_262p01700 at 187.584 kb on + strand, within PGA1_262p01700 at 187.659 kb on - strand, within PGA1_262p01700 at 187.705 kb on + strand, within PGA1_262p01700 at 187.850 kb on - strand at 187.850 kb on - strand at 187.984 kb on + strand at 188.117 kb on + strand, within PGA1_262p01710 at 188.176 kb on + strand, within PGA1_262p01710 at 188.322 kb on + strand, within PGA1_262p01710 at 188.405 kb on + strand, within PGA1_262p01710 at 188.449 kb on + strand, within PGA1_262p01710 at 188.457 kb on - strand, within PGA1_262p01710 at 188.527 kb on + strand, within PGA1_262p01710 at 188.641 kb on + strand, within PGA1_262p01710 at 188.714 kb on - strand, within PGA1_262p01710 at 188.726 kb on + strand, within PGA1_262p01710 at 188.980 kb on + strand at 188.988 kb on - strand at 189.046 kb on + strand, within PGA1_262p01720 at 189.046 kb on + strand, within PGA1_262p01720 at 189.095 kb on + strand, within PGA1_262p01720 at 189.173 kb on - strand, within PGA1_262p01720 at 189.361 kb on + strand, within PGA1_262p01720 at 189.393 kb on + strand, within PGA1_262p01720 at 189.474 kb on + strand, within PGA1_262p01720 at 189.474 kb on + strand, within PGA1_262p01720 at 189.476 kb on + strand, within PGA1_262p01720 at 189.476 kb on + strand, within PGA1_262p01720 at 189.476 kb on + strand, within PGA1_262p01720 at 189.482 kb on - strand, within PGA1_262p01720 at 189.482 kb on - strand, within PGA1_262p01720 at 189.494 kb on - strand, within PGA1_262p01720 at 189.540 kb on + strand, within PGA1_262p01720 at 189.540 kb on + strand, within PGA1_262p01720 at 189.586 kb on + strand, within PGA1_262p01720 at 189.647 kb on + strand, within PGA1_262p01720 at 189.685 kb on - strand, within PGA1_262p01720 at 189.695 kb on - strand, within PGA1_262p01720 at 189.698 kb on + strand, within PGA1_262p01720 at 189.825 kb on + strand at 189.835 kb on + strand at 189.893 kb on + strand at 189.899 kb on - strand at 189.899 kb on - strand at 189.940 kb on - strand, within PGA1_262p01730
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1.25 mM remove 187,195 - PGA1_262p01700 0.49 -0.2 187,534 - PGA1_262p01700 0.71 +0.0 187,584 + PGA1_262p01700 0.74 +0.2 187,659 - PGA1_262p01700 0.79 +1.6 187,705 + PGA1_262p01700 0.82 -1.5 187,850 - -0.7 187,850 - -1.0 187,984 + -0.5 188,117 + PGA1_262p01710 0.12 +0.0 188,176 + PGA1_262p01710 0.18 +1.0 188,322 + PGA1_262p01710 0.34 -0.3 188,405 + PGA1_262p01710 0.43 +1.7 188,449 + PGA1_262p01710 0.47 +1.3 188,457 - PGA1_262p01710 0.48 -0.8 188,527 + PGA1_262p01710 0.56 +2.8 188,641 + PGA1_262p01710 0.68 -1.2 188,714 - PGA1_262p01710 0.76 +0.6 188,726 + PGA1_262p01710 0.77 +0.5 188,980 + -0.3 188,988 - +0.7 189,046 + PGA1_262p01720 0.10 +0.3 189,046 + PGA1_262p01720 0.10 +2.3 189,095 + PGA1_262p01720 0.16 +0.0 189,173 - PGA1_262p01720 0.25 +0.8 189,361 + PGA1_262p01720 0.46 +0.3 189,393 + PGA1_262p01720 0.50 -0.3 189,474 + PGA1_262p01720 0.59 +0.0 189,474 + PGA1_262p01720 0.59 -0.0 189,476 + PGA1_262p01720 0.59 +0.0 189,476 + PGA1_262p01720 0.59 +0.0 189,476 + PGA1_262p01720 0.59 -0.6 189,482 - PGA1_262p01720 0.60 -0.4 189,482 - PGA1_262p01720 0.60 +2.6 189,494 - PGA1_262p01720 0.61 -1.5 189,540 + PGA1_262p01720 0.66 +1.3 189,540 + PGA1_262p01720 0.66 +0.0 189,586 + PGA1_262p01720 0.72 -2.3 189,647 + PGA1_262p01720 0.79 -0.8 189,685 - PGA1_262p01720 0.83 -0.6 189,695 - PGA1_262p01720 0.84 -0.3 189,698 + PGA1_262p01720 0.84 +0.0 189,825 + +1.4 189,835 + -0.2 189,893 + -0.5 189,899 - -1.1 189,899 - -0.5 189,940 - PGA1_262p01730 0.11 -0.4
Or see this region's nucleotide sequence