Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22870 and BWI76_RS22875 are separated by 536 nucleotides BWI76_RS22875 and BWI76_RS22880 are separated by 53 nucleotides
BWI76_RS22870: BWI76_RS22870 - LOG family protein, at 4,770,874 to 4,772,241
_RS22870
BWI76_RS22875: BWI76_RS22875 - serine transporter, at 4,772,778 to 4,774,067
_RS22875
BWI76_RS22880: BWI76_RS22880 - L-serine ammonia-lyase, at 4,774,121 to 4,775,488
_RS22880
Position (kb)
4772
4773
4774
4775 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4771.784 kb on + strand, within BWI76_RS22870 at 4771.916 kb on - strand, within BWI76_RS22870 at 4771.989 kb on + strand, within BWI76_RS22870 at 4772.059 kb on - strand, within BWI76_RS22870 at 4772.103 kb on - strand, within BWI76_RS22870 at 4772.186 kb on + strand at 4772.217 kb on - strand at 4772.286 kb on - strand at 4772.527 kb on - strand at 4772.785 kb on - strand at 4772.889 kb on + strand at 4772.971 kb on + strand, within BWI76_RS22875 at 4773.154 kb on + strand, within BWI76_RS22875 at 4773.274 kb on + strand, within BWI76_RS22875 at 4773.371 kb on - strand, within BWI76_RS22875 at 4773.434 kb on + strand, within BWI76_RS22875 at 4773.515 kb on - strand, within BWI76_RS22875 at 4773.542 kb on + strand, within BWI76_RS22875 at 4773.624 kb on + strand, within BWI76_RS22875 at 4773.632 kb on - strand, within BWI76_RS22875 at 4773.886 kb on + strand, within BWI76_RS22875 at 4773.947 kb on + strand at 4774.100 kb on + strand at 4774.168 kb on + strand at 4774.223 kb on - strand at 4774.382 kb on - strand, within BWI76_RS22880 at 4774.501 kb on + strand, within BWI76_RS22880
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 4,771,784 + BWI76_RS22870 0.67 -0.5 4,771,916 - BWI76_RS22870 0.76 +0.9 4,771,989 + BWI76_RS22870 0.82 -0.0 4,772,059 - BWI76_RS22870 0.87 -0.4 4,772,103 - BWI76_RS22870 0.90 -0.5 4,772,186 + +0.0 4,772,217 - -1.9 4,772,286 - -0.1 4,772,527 - -0.8 4,772,785 - +1.8 4,772,889 + -0.2 4,772,971 + BWI76_RS22875 0.15 -0.1 4,773,154 + BWI76_RS22875 0.29 -0.2 4,773,274 + BWI76_RS22875 0.38 -0.6 4,773,371 - BWI76_RS22875 0.46 -0.0 4,773,434 + BWI76_RS22875 0.51 -0.1 4,773,515 - BWI76_RS22875 0.57 -0.2 4,773,542 + BWI76_RS22875 0.59 -0.4 4,773,624 + BWI76_RS22875 0.66 +0.0 4,773,632 - BWI76_RS22875 0.66 +0.4 4,773,886 + BWI76_RS22875 0.86 +1.7 4,773,947 + -0.0 4,774,100 + +0.2 4,774,168 + -0.3 4,774,223 - -0.4 4,774,382 - BWI76_RS22880 0.19 +0.2 4,774,501 + BWI76_RS22880 0.28 +0.4
Or see this region's nucleotide sequence