Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20495 and BWI76_RS20500 are separated by 379 nucleotides
BWI76_RS20495: BWI76_RS20495 - alanine transaminase, at 4,290,961 to 4,292,199
_RS20495
BWI76_RS20500: BWI76_RS20500 - signal transduction histidine kinase LytS, at 4,292,579 to 4,294,276
_RS20500
Position (kb)
4290
4291
4292
4293 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4289.971 kb on - strand at 4289.971 kb on - strand at 4290.008 kb on + strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.016 kb on - strand at 4290.046 kb on + strand at 4290.046 kb on + strand at 4290.091 kb on + strand at 4290.096 kb on + strand at 4290.096 kb on + strand at 4290.101 kb on + strand at 4290.101 kb on + strand at 4290.102 kb on + strand at 4290.135 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.145 kb on + strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.153 kb on - strand at 4290.155 kb on + strand at 4290.155 kb on + strand at 4290.163 kb on - strand at 4290.164 kb on - strand at 4290.164 kb on - strand at 4290.166 kb on + strand at 4290.169 kb on - strand at 4290.188 kb on - strand at 4290.194 kb on + strand at 4290.288 kb on + strand at 4290.288 kb on + strand at 4290.289 kb on + strand at 4290.289 kb on + strand at 4290.289 kb on + strand at 4290.291 kb on + strand at 4290.291 kb on + strand at 4290.291 kb on + strand at 4290.291 kb on + strand at 4290.297 kb on - strand at 4290.299 kb on - strand at 4290.299 kb on - strand at 4290.306 kb on + strand at 4290.315 kb on + strand at 4290.322 kb on + strand at 4290.322 kb on - strand at 4290.323 kb on - strand at 4290.334 kb on + strand at 4290.369 kb on + strand at 4290.369 kb on + strand at 4290.377 kb on - strand at 4290.377 kb on - strand at 4290.377 kb on - strand at 4290.377 kb on - strand at 4290.386 kb on - strand at 4290.408 kb on + strand at 4290.446 kb on - strand at 4290.446 kb on - strand at 4290.448 kb on - strand at 4290.513 kb on - strand at 4290.698 kb on + strand at 4290.711 kb on - strand at 4290.721 kb on - strand at 4290.729 kb on + strand at 4290.743 kb on + strand at 4290.751 kb on - strand at 4290.987 kb on - strand at 4290.997 kb on + strand at 4291.005 kb on - strand at 4291.005 kb on - strand at 4291.005 kb on - strand at 4291.005 kb on - strand at 4291.191 kb on + strand, within BWI76_RS20495 at 4291.191 kb on + strand, within BWI76_RS20495 at 4291.199 kb on - strand, within BWI76_RS20495 at 4291.232 kb on - strand, within BWI76_RS20495 at 4291.232 kb on - strand, within BWI76_RS20495 at 4291.286 kb on + strand, within BWI76_RS20495 at 4291.336 kb on - strand, within BWI76_RS20495 at 4291.362 kb on + strand, within BWI76_RS20495 at 4291.362 kb on - strand, within BWI76_RS20495 at 4291.414 kb on - strand, within BWI76_RS20495 at 4291.431 kb on + strand, within BWI76_RS20495 at 4291.439 kb on - strand, within BWI76_RS20495 at 4291.439 kb on - strand, within BWI76_RS20495 at 4291.640 kb on - strand, within BWI76_RS20495 at 4291.653 kb on + strand, within BWI76_RS20495 at 4291.762 kb on + strand, within BWI76_RS20495 at 4291.829 kb on - strand, within BWI76_RS20495 at 4291.832 kb on - strand, within BWI76_RS20495 at 4291.863 kb on - strand, within BWI76_RS20495 at 4291.864 kb on + strand, within BWI76_RS20495 at 4292.021 kb on + strand, within BWI76_RS20495 at 4292.071 kb on - strand, within BWI76_RS20495 at 4292.222 kb on + strand at 4292.224 kb on - strand at 4292.230 kb on - strand at 4292.367 kb on - strand at 4292.571 kb on + strand at 4292.738 kb on + strand at 4292.738 kb on + strand at 4292.749 kb on + strand, within BWI76_RS20500 at 4292.749 kb on + strand, within BWI76_RS20500 at 4292.749 kb on + strand, within BWI76_RS20500 at 4292.757 kb on - strand, within BWI76_RS20500 at 4292.768 kb on - strand, within BWI76_RS20500 at 4292.972 kb on - strand, within BWI76_RS20500
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 4,289,971 - -1.1 4,289,971 - +1.3 4,290,008 + -0.5 4,290,016 - -1.0 4,290,016 - +1.5 4,290,016 - +0.3 4,290,016 - +0.0 4,290,016 - -2.2 4,290,016 - -1.4 4,290,016 - +1.2 4,290,016 - -1.6 4,290,016 - +1.2 4,290,016 - -0.0 4,290,046 + -0.0 4,290,046 + -0.5 4,290,091 + +0.7 4,290,096 + +0.3 4,290,096 + +0.6 4,290,101 + +0.1 4,290,101 + -0.0 4,290,102 + -2.0 4,290,135 + -1.4 4,290,145 + +1.4 4,290,145 + +0.6 4,290,145 + +0.8 4,290,145 + -0.6 4,290,145 + +0.9 4,290,145 + +0.1 4,290,145 + +0.1 4,290,145 + -0.8 4,290,145 + +0.2 4,290,145 + +0.1 4,290,145 + +0.7 4,290,145 + -0.6 4,290,145 + -0.3 4,290,153 - -1.0 4,290,153 - +0.4 4,290,153 - -0.2 4,290,153 - -1.0 4,290,153 - -0.3 4,290,153 - -0.8 4,290,153 - +0.1 4,290,153 - -0.2 4,290,155 + +0.1 4,290,155 + -0.3 4,290,163 - +1.1 4,290,164 - -1.5 4,290,164 - -1.1 4,290,166 + +0.7 4,290,169 - +0.1 4,290,188 - +0.1 4,290,194 + +0.2 4,290,288 + -0.5 4,290,288 + -0.2 4,290,289 + -0.2 4,290,289 + +0.2 4,290,289 + +2.4 4,290,291 + +0.0 4,290,291 + +1.8 4,290,291 + +0.5 4,290,291 + +0.4 4,290,297 - -0.8 4,290,299 - -0.5 4,290,299 - +0.3 4,290,306 + +0.2 4,290,315 + +0.5 4,290,322 + -0.1 4,290,322 - -2.2 4,290,323 - +0.4 4,290,334 + +0.0 4,290,369 + -0.1 4,290,369 + +0.8 4,290,377 - -0.2 4,290,377 - +0.5 4,290,377 - +0.4 4,290,377 - -0.5 4,290,386 - -0.2 4,290,408 + -0.9 4,290,446 - +0.8 4,290,446 - -0.1 4,290,448 - +0.2 4,290,513 - -0.1 4,290,698 + -0.4 4,290,711 - -0.5 4,290,721 - +1.0 4,290,729 + -0.0 4,290,743 + +0.9 4,290,751 - -0.4 4,290,987 - -0.4 4,290,997 + -0.8 4,291,005 - -1.2 4,291,005 - -0.6 4,291,005 - -1.6 4,291,005 - -1.3 4,291,191 + BWI76_RS20495 0.19 -1.7 4,291,191 + BWI76_RS20495 0.19 -2.1 4,291,199 - BWI76_RS20495 0.19 -1.3 4,291,232 - BWI76_RS20495 0.22 -1.3 4,291,232 - BWI76_RS20495 0.22 -0.6 4,291,286 + BWI76_RS20495 0.26 +0.4 4,291,336 - BWI76_RS20495 0.30 -1.3 4,291,362 + BWI76_RS20495 0.32 -1.4 4,291,362 - BWI76_RS20495 0.32 -1.4 4,291,414 - BWI76_RS20495 0.37 -0.9 4,291,431 + BWI76_RS20495 0.38 +0.5 4,291,439 - BWI76_RS20495 0.39 -1.1 4,291,439 - BWI76_RS20495 0.39 -1.8 4,291,640 - BWI76_RS20495 0.55 -1.4 4,291,653 + BWI76_RS20495 0.56 -1.4 4,291,762 + BWI76_RS20495 0.65 -1.6 4,291,829 - BWI76_RS20495 0.70 -1.0 4,291,832 - BWI76_RS20495 0.70 -1.6 4,291,863 - BWI76_RS20495 0.73 -1.4 4,291,864 + BWI76_RS20495 0.73 -2.2 4,292,021 + BWI76_RS20495 0.86 -0.2 4,292,071 - BWI76_RS20495 0.90 -1.4 4,292,222 + +0.8 4,292,224 - -0.9 4,292,230 - +1.1 4,292,367 - +0.1 4,292,571 + -1.1 4,292,738 + -0.8 4,292,738 + +1.5 4,292,749 + BWI76_RS20500 0.10 -0.5 4,292,749 + BWI76_RS20500 0.10 +0.1 4,292,749 + BWI76_RS20500 0.10 -0.7 4,292,757 - BWI76_RS20500 0.10 +1.8 4,292,768 - BWI76_RS20500 0.11 -0.0 4,292,972 - BWI76_RS20500 0.23 -0.0
Or see this region's nucleotide sequence