Experiment: 3-hydroxybutyric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05667 and H281DRAFT_05668 are separated by 19 nucleotides H281DRAFT_05668 and H281DRAFT_05669 are separated by 153 nucleotides H281DRAFT_05669 and H281DRAFT_05670 overlap by 1 nucleotides
H281DRAFT_05667: H281DRAFT_05667 - serine protease DegQ, at 84,354 to 85,568
_05667
H281DRAFT_05668: H281DRAFT_05668 - dinuclear metal center protein, YbgI/SA1388 family, at 85,588 to 86,334
_05668
H281DRAFT_05669: H281DRAFT_05669 - ubiquinol-cytochrome c reductase iron-sulfur subunit, at 86,488 to 87,186
_05669
H281DRAFT_05670: H281DRAFT_05670 - ubiquinol-cytochrome c reductase cytochrome b subunit, at 87,186 to 88,565
_05670
Position (kb) 85
86
87 Strain fitness (log2 ratio) -2
-1
0
1
2 at 84.607 kb on - strand, within H281DRAFT_05667 at 84.800 kb on - strand, within H281DRAFT_05667 at 84.905 kb on + strand, within H281DRAFT_05667 at 84.905 kb on + strand, within H281DRAFT_05667 at 84.905 kb on + strand, within H281DRAFT_05667 at 84.906 kb on - strand, within H281DRAFT_05667 at 84.906 kb on - strand, within H281DRAFT_05667 at 84.906 kb on - strand, within H281DRAFT_05667 at 84.906 kb on - strand, within H281DRAFT_05667 at 84.906 kb on - strand, within H281DRAFT_05667 at 84.981 kb on - strand, within H281DRAFT_05667 at 85.180 kb on - strand, within H281DRAFT_05667 at 85.186 kb on + strand, within H281DRAFT_05667 at 85.203 kb on + strand, within H281DRAFT_05667 at 85.203 kb on + strand, within H281DRAFT_05667 at 85.378 kb on + strand, within H281DRAFT_05667 at 85.378 kb on + strand, within H281DRAFT_05667 at 85.378 kb on + strand, within H281DRAFT_05667 at 85.379 kb on - strand at 85.379 kb on - strand, within H281DRAFT_05667 at 85.379 kb on - strand, within H281DRAFT_05667 at 85.379 kb on - strand, within H281DRAFT_05667 at 85.385 kb on + strand, within H281DRAFT_05667 at 85.385 kb on + strand, within H281DRAFT_05667 at 85.385 kb on + strand, within H281DRAFT_05667 at 85.562 kb on + strand at 85.563 kb on - strand at 85.585 kb on + strand at 85.585 kb on + strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.587 kb on + strand at 85.587 kb on + strand at 85.588 kb on - strand at 85.612 kb on + strand at 85.651 kb on + strand at 85.651 kb on + strand at 85.651 kb on + strand at 85.652 kb on - strand at 85.652 kb on - strand at 85.784 kb on - strand, within H281DRAFT_05668 at 85.922 kb on + strand, within H281DRAFT_05668 at 85.922 kb on + strand, within H281DRAFT_05668 at 85.923 kb on - strand at 86.158 kb on + strand, within H281DRAFT_05668 at 86.158 kb on + strand, within H281DRAFT_05668 at 86.174 kb on + strand, within H281DRAFT_05668 at 86.310 kb on + strand at 86.360 kb on + strand at 86.360 kb on + strand at 86.360 kb on + strand at 86.360 kb on + strand at 86.361 kb on - strand at 86.361 kb on - strand at 86.361 kb on - strand at 86.361 kb on - strand at 86.361 kb on - strand at 86.361 kb on - strand at 86.361 kb on - strand at 86.364 kb on + strand at 86.397 kb on + strand at 86.511 kb on + strand at 86.511 kb on + strand at 86.511 kb on + strand at 87.184 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-hydroxybutyric (C) remove 84,607 - H281DRAFT_05667 0.21 +0.1 84,800 - H281DRAFT_05667 0.37 +1.8 84,905 + H281DRAFT_05667 0.45 +0.9 84,905 + H281DRAFT_05667 0.45 +0.1 84,905 + H281DRAFT_05667 0.45 +1.5 84,906 - H281DRAFT_05667 0.45 +0.1 84,906 - H281DRAFT_05667 0.45 -0.0 84,906 - H281DRAFT_05667 0.45 -0.6 84,906 - H281DRAFT_05667 0.45 +0.2 84,906 - H281DRAFT_05667 0.45 +1.0 84,981 - H281DRAFT_05667 0.52 -1.7 85,180 - H281DRAFT_05667 0.68 +0.4 85,186 + H281DRAFT_05667 0.68 +0.2 85,203 + H281DRAFT_05667 0.70 +0.6 85,203 + H281DRAFT_05667 0.70 +0.6 85,378 + H281DRAFT_05667 0.84 +0.5 85,378 + H281DRAFT_05667 0.84 +0.0 85,378 + H281DRAFT_05667 0.84 +0.1 85,379 - +0.3 85,379 - H281DRAFT_05667 0.84 -0.9 85,379 - H281DRAFT_05667 0.84 +0.2 85,379 - H281DRAFT_05667 0.84 -0.7 85,385 + H281DRAFT_05667 0.85 +0.3 85,385 + H281DRAFT_05667 0.85 -0.1 85,385 + H281DRAFT_05667 0.85 -1.4 85,562 + +0.2 85,563 - +1.8 85,585 + +0.7 85,585 + +0.9 85,586 - +0.4 85,586 - -0.1 85,586 - +1.1 85,586 - -0.5 85,586 - +0.9 85,586 - +0.0 85,586 - +0.3 85,586 - +0.1 85,587 + +1.2 85,587 + +0.4 85,588 - +0.2 85,612 + +1.5 85,651 + -0.2 85,651 + -0.8 85,651 + +0.4 85,652 - +0.0 85,652 - +0.1 85,784 - H281DRAFT_05668 0.26 -1.6 85,922 + H281DRAFT_05668 0.45 +0.4 85,922 + H281DRAFT_05668 0.45 -0.5 85,923 - +2.3 86,158 + H281DRAFT_05668 0.76 -0.6 86,158 + H281DRAFT_05668 0.76 -0.3 86,174 + H281DRAFT_05668 0.78 -0.2 86,310 + +0.4 86,360 + +0.2 86,360 + -1.2 86,360 + +0.2 86,360 + -1.8 86,361 - -0.3 86,361 - +0.6 86,361 - +0.0 86,361 - +0.4 86,361 - -0.4 86,361 - +0.2 86,361 - -0.5 86,364 + +0.2 86,397 + -0.3 86,511 + +0.3 86,511 + -1.0 86,511 + +0.4 87,184 + +0.2
Or see this region's nucleotide sequence