Experiment: 3-hydroxybutyric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01155 and H281DRAFT_01156 are separated by 108 nucleotides H281DRAFT_01156 and H281DRAFT_01157 are separated by 41 nucleotides H281DRAFT_01157 and H281DRAFT_01158 are separated by 311 nucleotides
H281DRAFT_01155: H281DRAFT_01155 - 2,5-dioxopentanoate dehydrogenase (NAD+), at 1,304,301 to 1,305,746
_01155
H281DRAFT_01156: H281DRAFT_01156 - Protein N-acetyltransferase, RimJ/RimL family, at 1,305,855 to 1,306,433
_01156
H281DRAFT_01157: H281DRAFT_01157 - 2-keto-3-deoxygluconate permease, at 1,306,475 to 1,307,491
_01157
H281DRAFT_01158: H281DRAFT_01158 - 4-deoxy-L-threo-5-hexulose uronate isomerase, at 1,307,803 to 1,308,639
_01158
Position (kb) 1306
1307
1308 Strain fitness (log2 ratio) -1
0
1 at 1305.708 kb on + strand at 1305.744 kb on + strand at 1305.782 kb on + strand at 1305.789 kb on - strand at 1305.855 kb on - strand at 1305.855 kb on - strand at 1306.001 kb on + strand, within H281DRAFT_01156 at 1306.147 kb on + strand, within H281DRAFT_01156 at 1306.179 kb on - strand, within H281DRAFT_01156 at 1306.347 kb on - strand, within H281DRAFT_01156 at 1306.452 kb on + strand at 1306.452 kb on + strand at 1306.487 kb on - strand at 1307.579 kb on + strand at 1307.579 kb on + strand at 1307.580 kb on - strand at 1307.917 kb on + strand, within H281DRAFT_01158 at 1307.917 kb on + strand at 1308.014 kb on - strand, within H281DRAFT_01158 at 1308.295 kb on - strand, within H281DRAFT_01158 at 1308.415 kb on + strand, within H281DRAFT_01158 at 1308.416 kb on - strand, within H281DRAFT_01158
Per-strain Table
Position Strand Gene LocusTag Fraction 3-hydroxybutyric (C) remove 1,305,708 + +0.0 1,305,744 + +0.6 1,305,782 + -0.3 1,305,789 - +0.2 1,305,855 - -0.2 1,305,855 - +0.2 1,306,001 + H281DRAFT_01156 0.25 -0.3 1,306,147 + H281DRAFT_01156 0.50 -0.5 1,306,179 - H281DRAFT_01156 0.56 +1.1 1,306,347 - H281DRAFT_01156 0.85 -0.6 1,306,452 + +0.1 1,306,452 + -0.3 1,306,487 - +1.3 1,307,579 + +0.2 1,307,579 + -0.1 1,307,580 - -0.0 1,307,917 + H281DRAFT_01158 0.14 -0.4 1,307,917 + -0.4 1,308,014 - H281DRAFT_01158 0.25 -0.9 1,308,295 - H281DRAFT_01158 0.59 -0.6 1,308,415 + H281DRAFT_01158 0.73 +0.0 1,308,416 - H281DRAFT_01158 0.73 +0.4
Or see this region's nucleotide sequence