Experiment: 3-hydroxybutyric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00019 and H281DRAFT_00020 are separated by 165 nucleotides H281DRAFT_00020 and H281DRAFT_00021 are separated by 198 nucleotides H281DRAFT_00021 and H281DRAFT_00022 are separated by 386 nucleotides
H281DRAFT_00019: H281DRAFT_00019 - transcriptional regulator, LysR family, at 20,574 to 21,485
_00019
H281DRAFT_00020: H281DRAFT_00020 - Glutathione S-transferase, at 21,651 to 22,349
_00020
H281DRAFT_00021: H281DRAFT_00021 - hypothetical protein, at 22,548 to 22,817
_00021
H281DRAFT_00022: H281DRAFT_00022 - Transposase IS66 family protein, at 23,204 to 23,734
_00022
Position (kb) 21
22
23 Strain fitness (log2 ratio) -1
0
1 at 20.740 kb on + strand, within H281DRAFT_00019 at 20.803 kb on - strand, within H281DRAFT_00019 at 20.885 kb on + strand, within H281DRAFT_00019 at 20.896 kb on + strand, within H281DRAFT_00019 at 20.896 kb on + strand, within H281DRAFT_00019 at 20.896 kb on + strand, within H281DRAFT_00019 at 20.897 kb on - strand, within H281DRAFT_00019 at 21.002 kb on + strand, within H281DRAFT_00019 at 21.002 kb on + strand, within H281DRAFT_00019 at 21.003 kb on - strand, within H281DRAFT_00019 at 21.003 kb on - strand, within H281DRAFT_00019 at 21.004 kb on + strand, within H281DRAFT_00019 at 21.004 kb on + strand, within H281DRAFT_00019 at 21.036 kb on + strand, within H281DRAFT_00019 at 21.093 kb on - strand, within H281DRAFT_00019 at 21.093 kb on - strand, within H281DRAFT_00019 at 21.093 kb on - strand, within H281DRAFT_00019 at 21.096 kb on + strand, within H281DRAFT_00019 at 21.097 kb on - strand, within H281DRAFT_00019 at 21.549 kb on - strand at 21.606 kb on + strand at 21.606 kb on + strand at 21.763 kb on - strand, within H281DRAFT_00020 at 21.889 kb on - strand, within H281DRAFT_00020 at 22.023 kb on - strand, within H281DRAFT_00020 at 22.038 kb on - strand, within H281DRAFT_00020 at 22.178 kb on + strand, within H281DRAFT_00020 at 22.178 kb on + strand, within H281DRAFT_00020 at 22.179 kb on - strand, within H281DRAFT_00020 at 22.302 kb on + strand at 22.407 kb on + strand at 22.436 kb on + strand at 22.441 kb on + strand at 22.441 kb on + strand at 22.457 kb on - strand at 22.530 kb on + strand at 22.542 kb on + strand at 22.543 kb on - strand at 22.554 kb on - strand at 22.698 kb on - strand, within H281DRAFT_00021 at 22.698 kb on - strand, within H281DRAFT_00021 at 22.754 kb on + strand, within H281DRAFT_00021 at 22.754 kb on + strand at 22.763 kb on + strand, within H281DRAFT_00021 at 22.781 kb on + strand, within H281DRAFT_00021 at 22.811 kb on - strand at 22.863 kb on + strand at 22.864 kb on - strand at 22.945 kb on + strand at 23.036 kb on + strand at 23.037 kb on - strand at 23.207 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-hydroxybutyric (C) remove 20,740 + H281DRAFT_00019 0.18 +0.2 20,803 - H281DRAFT_00019 0.25 -0.8 20,885 + H281DRAFT_00019 0.34 +0.1 20,896 + H281DRAFT_00019 0.35 +1.0 20,896 + H281DRAFT_00019 0.35 -0.6 20,896 + H281DRAFT_00019 0.35 -0.5 20,897 - H281DRAFT_00019 0.35 -0.1 21,002 + H281DRAFT_00019 0.47 -0.8 21,002 + H281DRAFT_00019 0.47 -0.1 21,003 - H281DRAFT_00019 0.47 -0.2 21,003 - H281DRAFT_00019 0.47 -0.0 21,004 + H281DRAFT_00019 0.47 +0.2 21,004 + H281DRAFT_00019 0.47 +0.0 21,036 + H281DRAFT_00019 0.51 -0.2 21,093 - H281DRAFT_00019 0.57 -0.3 21,093 - H281DRAFT_00019 0.57 -0.2 21,093 - H281DRAFT_00019 0.57 -0.1 21,096 + H281DRAFT_00019 0.57 +0.1 21,097 - H281DRAFT_00019 0.57 -1.6 21,549 - +0.1 21,606 + +0.9 21,606 + +0.4 21,763 - H281DRAFT_00020 0.16 -0.4 21,889 - H281DRAFT_00020 0.34 -0.0 22,023 - H281DRAFT_00020 0.53 +1.1 22,038 - H281DRAFT_00020 0.55 +0.6 22,178 + H281DRAFT_00020 0.75 +0.6 22,178 + H281DRAFT_00020 0.75 +0.6 22,179 - H281DRAFT_00020 0.76 +1.0 22,302 + +0.5 22,407 + +0.1 22,436 + -0.5 22,441 + -0.4 22,441 + +0.6 22,457 - +0.5 22,530 + -0.2 22,542 + +0.2 22,543 - +0.3 22,554 - +0.2 22,698 - H281DRAFT_00021 0.56 -0.3 22,698 - H281DRAFT_00021 0.56 -0.7 22,754 + H281DRAFT_00021 0.76 -0.3 22,754 + +0.4 22,763 + H281DRAFT_00021 0.80 -0.4 22,781 + H281DRAFT_00021 0.86 +0.9 22,811 - +0.5 22,863 + +1.0 22,864 - +0.3 22,945 + -0.4 23,036 + +0.3 23,037 - +0.3 23,207 + +0.3
Or see this region's nucleotide sequence