Strain Fitness in Marinobacter adhaerens HP15 around HP15_445

Experiment: L-Phenylalanine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_444 and HP15_445 are separated by 131 nucleotidesHP15_445 and HP15_446 are separated by 23 nucleotides HP15_444: HP15_444 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, at 447,850 to 449,271 _444 HP15_445: HP15_445 - beta 1,4 glucosyltransferase, at 449,403 to 450,197 _445 HP15_446: HP15_446 - glycosyltransferase, at 450,221 to 451,276 _446 Position (kb) 449 450 451Strain fitness (log2 ratio) -2 -1 0 1 2at 449.436 kb on - strandat 449.526 kb on - strand, within HP15_445at 449.583 kb on + strand, within HP15_445at 449.584 kb on - strand, within HP15_445at 449.680 kb on - strand, within HP15_445at 449.870 kb on + strand, within HP15_445at 449.870 kb on + strand, within HP15_445at 449.878 kb on - strand, within HP15_445at 449.878 kb on - strand, within HP15_445at 449.883 kb on - strand, within HP15_445at 449.915 kb on - strand, within HP15_445at 450.154 kb on - strandat 450.156 kb on + strandat 450.204 kb on + strandat 450.204 kb on + strandat 450.334 kb on + strand, within HP15_446at 450.334 kb on + strand, within HP15_446at 450.342 kb on - strand, within HP15_446at 450.352 kb on - strand, within HP15_446at 450.352 kb on - strand, within HP15_446at 450.352 kb on - strand, within HP15_446at 450.391 kb on - strand, within HP15_446at 450.443 kb on + strand, within HP15_446at 450.465 kb on - strand, within HP15_446at 450.485 kb on + strand, within HP15_446at 450.516 kb on + strand, within HP15_446at 450.542 kb on + strand, within HP15_446at 450.550 kb on - strand, within HP15_446at 450.553 kb on - strand, within HP15_446at 450.611 kb on + strand, within HP15_446at 450.701 kb on - strand, within HP15_446at 450.702 kb on + strand, within HP15_446at 450.707 kb on - strand, within HP15_446at 450.707 kb on - strand, within HP15_446at 450.763 kb on + strand, within HP15_446at 450.783 kb on - strand, within HP15_446at 450.823 kb on - strand, within HP15_446at 450.918 kb on - strand, within HP15_446at 450.937 kb on - strand, within HP15_446at 450.990 kb on + strand, within HP15_446at 451.087 kb on - strand, within HP15_446

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine
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449,436 - +0.0
449,526 - HP15_445 0.15 -0.4
449,583 + HP15_445 0.23 +1.9
449,584 - HP15_445 0.23 +1.5
449,680 - HP15_445 0.35 +0.7
449,870 + HP15_445 0.59 -0.3
449,870 + HP15_445 0.59 +1.3
449,878 - HP15_445 0.60 +1.8
449,878 - HP15_445 0.60 +2.3
449,883 - HP15_445 0.60 +0.5
449,915 - HP15_445 0.64 +2.3
450,154 - +0.4
450,156 + -0.3
450,204 + +1.7
450,204 + -0.3
450,334 + HP15_446 0.11 +0.5
450,334 + HP15_446 0.11 +2.1
450,342 - HP15_446 0.11 -0.2
450,352 - HP15_446 0.12 -0.4
450,352 - HP15_446 0.12 -0.0
450,352 - HP15_446 0.12 +0.2
450,391 - HP15_446 0.16 -2.0
450,443 + HP15_446 0.21 +0.6
450,465 - HP15_446 0.23 -0.1
450,485 + HP15_446 0.25 -0.7
450,516 + HP15_446 0.28 +1.1
450,542 + HP15_446 0.30 +0.2
450,550 - HP15_446 0.31 +0.0
450,553 - HP15_446 0.31 +0.2
450,611 + HP15_446 0.37 +0.3
450,701 - HP15_446 0.45 +1.5
450,702 + HP15_446 0.46 +0.8
450,707 - HP15_446 0.46 +0.3
450,707 - HP15_446 0.46 +0.4
450,763 + HP15_446 0.51 +0.8
450,783 - HP15_446 0.53 +0.0
450,823 - HP15_446 0.57 +0.4
450,918 - HP15_446 0.66 -0.8
450,937 - HP15_446 0.68 +0.8
450,990 + HP15_446 0.73 +0.2
451,087 - HP15_446 0.82 +0.8

Or see this region's nucleotide sequence