Strain Fitness in Marinobacter adhaerens HP15 around HP15_3676

Experiment: L-Phenylalanine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3674 and HP15_3675 are separated by 55 nucleotidesHP15_3675 and HP15_3676 are separated by 101 nucleotidesHP15_3676 and HP15_3677 are separated by 30 nucleotides HP15_3674: HP15_3674 - AraC-family transcriptional regulator, at 3,873,481 to 3,874,440 _3674 HP15_3675: HP15_3675 - conserved hypothetical protein, at 3,874,496 to 3,874,966 _3675 HP15_3676: HP15_3676 - glucosamine-fructose-6-phosphate aminotransferase, isomerizing, at 3,875,068 to 3,876,900 _3676 HP15_3677: HP15_3677 - bifunctional protein GlmU, at 3,876,931 to 3,878,199 _3677 Position (kb) 3875 3876 3877Strain fitness (log2 ratio) -1 0 1 2at 3874.088 kb on + strand, within HP15_3674at 3874.167 kb on + strand, within HP15_3674at 3874.175 kb on - strand, within HP15_3674at 3874.232 kb on - strand, within HP15_3674at 3874.318 kb on - strand, within HP15_3674at 3874.348 kb on - strandat 3874.382 kb on + strandat 3874.440 kb on + strandat 3874.440 kb on + strandat 3874.440 kb on + strandat 3874.448 kb on - strandat 3874.448 kb on - strandat 3874.457 kb on - strandat 3874.459 kb on + strandat 3874.467 kb on + strandat 3874.487 kb on + strandat 3874.502 kb on - strandat 3874.671 kb on - strand, within HP15_3675at 3874.695 kb on - strand, within HP15_3675at 3874.706 kb on + strand, within HP15_3675at 3874.748 kb on + strand, within HP15_3675at 3874.810 kb on + strand, within HP15_3675at 3874.953 kb on - strandat 3874.955 kb on + strandat 3875.052 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine
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3,874,088 + HP15_3674 0.63 -0.2
3,874,167 + HP15_3674 0.71 +0.3
3,874,175 - HP15_3674 0.72 +0.2
3,874,232 - HP15_3674 0.78 -1.1
3,874,318 - HP15_3674 0.87 -0.5
3,874,348 - -0.4
3,874,382 + -0.5
3,874,440 + +0.9
3,874,440 + +0.5
3,874,440 + +0.3
3,874,448 - +1.1
3,874,448 - +1.3
3,874,457 - -0.9
3,874,459 + +2.3
3,874,467 + -1.3
3,874,487 + -0.6
3,874,502 - +1.8
3,874,671 - HP15_3675 0.37 -0.7
3,874,695 - HP15_3675 0.42 +2.3
3,874,706 + HP15_3675 0.45 -0.0
3,874,748 + HP15_3675 0.54 -1.4
3,874,810 + HP15_3675 0.67 +1.1
3,874,953 - +1.5
3,874,955 + +2.2
3,875,052 + +0.1

Or see this region's nucleotide sequence