Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33100

Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Benzalkonium Chloride 0.004 mg/ml
3,467,409	+		PGA1_c33090	0.63	-1.1
3,467,414	+		PGA1_c33090	0.64	+0.3
3,467,414	+		PGA1_c33090	0.64	+0.6
3,467,414	+		PGA1_c33090	0.64	-1.5
3,467,417	-		PGA1_c33090	0.64	-1.0
3,467,422	-		PGA1_c33090	0.66	-0.4
3,467,436	-		PGA1_c33090	0.69	+0.4
3,467,460	-		PGA1_c33090	0.75	-0.8
3,467,461	+		PGA1_c33090	0.75	+0.1
3,467,467	-		PGA1_c33090	0.77	-0.7
3,467,482	+		PGA1_c33090	0.80	-0.5
3,467,520	+		PGA1_c33090	0.89	-2.2
3,467,520	+		PGA1_c33090	0.89	+1.9
3,467,520	+		PGA1_c33090	0.89	+1.6
3,467,557	+				+1.0
3,467,560	-				-0.6
3,467,567	-				-2.2
3,467,575	-				-1.0
3,467,643	+				-1.0
3,467,695	+				+0.1
3,467,703	-				-0.4
3,467,736	+		PGA1_c33095	0.13	-0.2
3,467,736	-		PGA1_c33095	0.13	-0.5
3,467,795	-		PGA1_c33095	0.20	-1.2
3,467,802	+		PGA1_c33095	0.21	+0.0
3,467,802	+		PGA1_c33095	0.21	-2.8
3,467,806	-		PGA1_c33095	0.22	+0.5
3,467,828	+		PGA1_c33095	0.24	-0.8
3,467,833	+		PGA1_c33095	0.25	+1.8
3,467,963	+		PGA1_c33095	0.41	+1.6
3,467,963	+		PGA1_c33095	0.41	+2.0
3,467,968	+		PGA1_c33095	0.41	-1.0
3,467,971	-		PGA1_c33095	0.42	-0.8
3,467,973	+		PGA1_c33095	0.42	-1.2
3,467,976	-		PGA1_c33095	0.42	-0.1
3,467,981	-		PGA1_c33095	0.43	-0.3
3,467,981	-		PGA1_c33095	0.43	+1.0
3,467,981	-		PGA1_c33095	0.43	-0.4
3,468,007	-		PGA1_c33095	0.46	-0.7
3,468,025	+		PGA1_c33095	0.48	-1.4
3,468,145	+		PGA1_c33095	0.63	-0.5
3,468,153	-		PGA1_c33095	0.64	-0.2
3,468,158	-		PGA1_c33095	0.64	-0.1
3,468,170	+		PGA1_c33095	0.66	+0.3
3,468,178	-		PGA1_c33095	0.67	-1.2
3,468,209	-		PGA1_c33095	0.70	+1.4
3,468,209	-		PGA1_c33095	0.70	+0.9
3,468,209	-		PGA1_c33095	0.70	+2.0
3,468,230	-		PGA1_c33095	0.73	-2.1
3,468,240	+		PGA1_c33095	0.74	+0.0
3,468,335	+				+2.0
3,468,378	+				+0.6
3,468,396	-				+0.1
3,468,502	+		PGA1_c33100	0.24	+0.4
3,468,528	-		PGA1_c33100	0.27	+1.0
3,468,571	+		PGA1_c33100	0.32	+1.4
3,468,613	-		PGA1_c33100	0.37	+0.2
3,468,636	+		PGA1_c33100	0.39	+1.0
3,468,641	+		PGA1_c33100	0.40	-0.1
3,468,645	-		PGA1_c33100	0.40	-0.5
3,468,715	-		PGA1_c33100	0.48	-0.9
3,468,715	-		PGA1_c33100	0.48	+0.3
3,468,785	+		PGA1_c33100	0.56	+1.4
3,468,793	-		PGA1_c33100	0.57	+1.2
3,468,793	-		PGA1_c33100	0.57	-0.5
3,468,812	+		PGA1_c33100	0.59	+0.6
3,468,812	+		PGA1_c33100	0.59	-0.9
3,468,824	+		PGA1_c33100	0.61	-1.4
3,468,824	+		PGA1_c33100	0.61	-1.0
3,468,869	-		PGA1_c33100	0.66	+0.6
3,468,886	+		PGA1_c33100	0.67	-0.6
3,468,916	+		PGA1_c33100	0.71	-0.2
3,468,929	-		PGA1_c33100	0.72	+0.2
3,468,961	+		PGA1_c33100	0.76	-0.5
3,468,961	+		PGA1_c33100	0.76	-1.5
3,468,969	-		PGA1_c33100	0.77	-2.2
3,468,969	-		PGA1_c33100	0.77	-0.1
3,469,011	-		PGA1_c33100	0.81	+0.4
3,469,023	+		PGA1_c33100	0.83	-1.7
3,469,036	-		PGA1_c33100	0.84	-0.1
3,469,092	-				-0.3
3,469,138	+				-2.2
3,469,138	+				+0.6
3,469,140	+				+0.6
3,469,230	-				+0.2
3,469,245	+				+0.0
3,469,253	-				-0.8
3,469,270	+				+1.4
3,469,275	+				+0.5
3,469,275	+				+0.3
3,469,275	+				-0.3
3,469,278	-				-2.0
3,469,279	-				-0.4
3,469,283	-				-0.9
3,469,283	-				+0.4
3,469,283	-				-0.4
3,469,283	-				-1.4
3,469,288	-				+2.4
3,469,312	+				+0.9
3,469,312	+				-2.0
3,469,337	-				-0.2
3,469,378	+				+0.0
3,469,386	-				+0.3
3,469,386	-				+0.7
3,469,414	+				-2.5
3,469,421	+				-0.3
3,469,448	+				-0.4
3,469,455	+				-0.7
3,469,457	-				+0.8
3,469,497	+				+0.3
3,469,497	+				-2.0
3,469,525	+				-0.4
3,469,545	+				+0.2
3,469,559	-				-0.1
3,469,609	-		PGA1_c33110	0.10	-2.1
3,469,659	+		PGA1_c33110	0.12	-1.4
3,469,659	+		PGA1_c33110	0.12	+0.5
3,469,659	+		PGA1_c33110	0.12	-3.0
3,469,659	+		PGA1_c33110	0.12	+1.0
3,469,659	+		PGA1_c33110	0.12	+0.7
3,469,713	+		PGA1_c33110	0.14	+0.6
3,469,713	+		PGA1_c33110	0.14	-1.5
3,469,713	+		PGA1_c33110	0.14	+0.6
3,469,713	+		PGA1_c33110	0.14	-0.4
3,469,721	-		PGA1_c33110	0.15	-2.0
3,469,721	-		PGA1_c33110	0.15	-0.7
3,469,721	-		PGA1_c33110	0.15	-0.8
3,469,721	-		PGA1_c33110	0.15	-0.7
3,469,721	-		PGA1_c33110	0.15	+1.6
3,469,721	-		PGA1_c33110	0.15	-1.6
3,469,721	-		PGA1_c33110	0.15	+0.4
3,469,799	-		PGA1_c33110	0.18	-0.5
3,469,818	-		PGA1_c33110	0.19	+0.5
3,469,838	-		PGA1_c33110	0.20	-1.0
3,469,838	-		PGA1_c33110	0.20	+2.7
3,469,840	+		PGA1_c33110	0.20	-0.2
3,469,878	-		PGA1_c33110	0.21	+1.3
3,469,928	+		PGA1_c33110	0.23	-1.0
3,469,938	-		PGA1_c33110	0.24	+1.1
3,469,940	+		PGA1_c33110	0.24	-0.6
3,469,942	+		PGA1_c33110	0.24	-0.5
3,469,942	+		PGA1_c33110	0.24	+1.0
3,469,950	-		PGA1_c33110	0.24	-1.0
3,469,955	-		PGA1_c33110	0.24	+0.3
3,469,967	-		PGA1_c33110	0.25	+1.0
3,469,998	+		PGA1_c33110	0.26	-0.4
3,470,078	-		PGA1_c33110	0.29	+0.9
3,470,079	+		PGA1_c33110	0.29	-1.4
3,470,094	+		PGA1_c33110	0.30	+0.8
3,470,121	+		PGA1_c33110	0.31	+0.6