Strain Fitness in Marinobacter adhaerens HP15 around HP15_1458

Experiment: L-Phenylalanine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1456 and HP15_1457 are separated by 232 nucleotidesHP15_1457 and HP15_1458 are separated by 73 nucleotidesHP15_1458 and HP15_1459 are separated by 176 nucleotides HP15_1456: HP15_1456 - extracellular solute-binding protein, family 1, at 1,532,308 to 1,533,318 _1456 HP15_1457: HP15_1457 - HAD-superfamily subfamily IB, PSPase-like protein, at 1,533,551 to 1,533,790 _1457 HP15_1458: HP15_1458 - conserved hypothetical protein, at 1,533,864 to 1,534,457 _1458 HP15_1459: HP15_1459 - metal dependent phosphohydrolase, at 1,534,634 to 1,535,941 _1459 Position (kb) 1533 1534 1535Strain fitness (log2 ratio) -1 0 1 2at 1532.895 kb on + strand, within HP15_1456at 1532.988 kb on - strand, within HP15_1456at 1533.217 kb on - strand, within HP15_1456at 1533.217 kb on - strand, within HP15_1456at 1533.476 kb on + strandat 1533.533 kb on - strandat 1533.629 kb on + strand, within HP15_1457at 1533.806 kb on + strandat 1533.825 kb on - strandat 1533.910 kb on + strandat 1533.918 kb on - strandat 1534.013 kb on - strand, within HP15_1458at 1534.081 kb on - strand, within HP15_1458at 1534.289 kb on + strand, within HP15_1458at 1534.316 kb on + strand, within HP15_1458at 1534.324 kb on - strand, within HP15_1458at 1534.368 kb on - strand, within HP15_1458at 1534.410 kb on - strandat 1534.410 kb on - strandat 1534.410 kb on - strandat 1534.694 kb on + strandat 1534.702 kb on - strandat 1534.702 kb on - strandat 1534.712 kb on - strandat 1534.876 kb on + strand, within HP15_1459at 1534.876 kb on + strand, within HP15_1459at 1535.069 kb on + strand, within HP15_1459at 1535.142 kb on - strand, within HP15_1459at 1535.178 kb on + strand, within HP15_1459at 1535.246 kb on - strand, within HP15_1459at 1535.256 kb on - strand, within HP15_1459at 1535.319 kb on + strand, within HP15_1459at 1535.327 kb on - strand, within HP15_1459at 1535.327 kb on - strand, within HP15_1459at 1535.389 kb on + strand, within HP15_1459at 1535.389 kb on + strand, within HP15_1459at 1535.389 kb on + strand, within HP15_1459at 1535.397 kb on - strand, within HP15_1459at 1535.397 kb on - strand, within HP15_1459

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine
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1,532,895 + HP15_1456 0.58 +1.8
1,532,988 - HP15_1456 0.67 -0.4
1,533,217 - HP15_1456 0.90 -0.4
1,533,217 - HP15_1456 0.90 +0.2
1,533,476 + -0.2
1,533,533 - +0.9
1,533,629 + HP15_1457 0.33 +0.9
1,533,806 + +1.1
1,533,825 - +0.4
1,533,910 + +1.4
1,533,918 - -0.7
1,534,013 - HP15_1458 0.25 +1.9
1,534,081 - HP15_1458 0.37 +1.1
1,534,289 + HP15_1458 0.72 +0.4
1,534,316 + HP15_1458 0.76 +0.3
1,534,324 - HP15_1458 0.77 +1.1
1,534,368 - HP15_1458 0.85 -0.1
1,534,410 - +1.2
1,534,410 - +2.2
1,534,410 - -1.2
1,534,694 + -0.3
1,534,702 - +1.2
1,534,702 - -0.4
1,534,712 - -0.4
1,534,876 + HP15_1459 0.19 +1.4
1,534,876 + HP15_1459 0.19 -0.7
1,535,069 + HP15_1459 0.33 +1.2
1,535,142 - HP15_1459 0.39 -0.2
1,535,178 + HP15_1459 0.42 +2.4
1,535,246 - HP15_1459 0.47 -0.7
1,535,256 - HP15_1459 0.48 +0.3
1,535,319 + HP15_1459 0.52 +0.6
1,535,327 - HP15_1459 0.53 -0.3
1,535,327 - HP15_1459 0.53 -0.9
1,535,389 + HP15_1459 0.58 -0.5
1,535,389 + HP15_1459 0.58 -0.8
1,535,389 + HP15_1459 0.58 -0.3
1,535,397 - HP15_1459 0.58 +2.4
1,535,397 - HP15_1459 0.58 +1.2

Or see this region's nucleotide sequence