Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11695 and BWI76_RS11700 are separated by 208 nucleotides BWI76_RS11700 and BWI76_RS11705 are separated by 4 nucleotides BWI76_RS11705 and BWI76_RS11710 are separated by 34 nucleotides BWI76_RS11710 and BWI76_RS11715 are separated by 102 nucleotides
BWI76_RS11695: BWI76_RS11695 - ATP-independent periplasmic protein-refolding chaperone, at 2,461,237 to 2,461,719
_RS11695
BWI76_RS11700: BWI76_RS11700 - hypothetical protein, at 2,461,928 to 2,462,470
_RS11700
BWI76_RS11705: BWI76_RS11705 - hypothetical protein, at 2,462,475 to 2,464,517
_RS11705
BWI76_RS11710: BWI76_RS11710 - nucleotide excision repair endonuclease, at 2,464,552 to 2,465,412
_RS11710
BWI76_RS11715: BWI76_RS11715 - NAD(+) synthetase, at 2,465,515 to 2,466,342
_RS11715
Position (kb)
2462
2463
2464
2465 Strain fitness (log2 ratio)
-2
-1
0
1 at 2461.479 kb on - strand, within BWI76_RS11695 at 2461.480 kb on - strand, within BWI76_RS11695 at 2461.535 kb on - strand, within BWI76_RS11695 at 2461.554 kb on + strand, within BWI76_RS11695 at 2461.579 kb on + strand, within BWI76_RS11695 at 2461.714 kb on + strand at 2461.714 kb on + strand at 2461.731 kb on + strand at 2461.777 kb on - strand at 2461.777 kb on - strand at 2461.777 kb on - strand at 2461.777 kb on - strand at 2461.857 kb on - strand at 2461.869 kb on - strand at 2462.037 kb on + strand, within BWI76_RS11700 at 2462.426 kb on + strand at 2462.634 kb on + strand at 2462.979 kb on + strand, within BWI76_RS11705 at 2463.547 kb on - strand, within BWI76_RS11705 at 2463.739 kb on + strand, within BWI76_RS11705 at 2464.134 kb on - strand, within BWI76_RS11705 at 2464.152 kb on + strand, within BWI76_RS11705 at 2464.354 kb on + strand at 2464.364 kb on + strand at 2464.364 kb on - strand at 2464.443 kb on - strand at 2464.458 kb on - strand at 2464.567 kb on - strand at 2464.988 kb on - strand, within BWI76_RS11710 at 2465.039 kb on - strand, within BWI76_RS11710 at 2465.052 kb on + strand, within BWI76_RS11710 at 2465.137 kb on - strand, within BWI76_RS11710
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 2,461,479 - BWI76_RS11695 0.50 -0.8 2,461,480 - BWI76_RS11695 0.50 +0.3 2,461,535 - BWI76_RS11695 0.62 -0.0 2,461,554 + BWI76_RS11695 0.66 +0.3 2,461,579 + BWI76_RS11695 0.71 -0.1 2,461,714 + +0.5 2,461,714 + -0.2 2,461,731 + -0.7 2,461,777 - +0.6 2,461,777 - +0.9 2,461,777 - +0.1 2,461,777 - +0.1 2,461,857 - +0.0 2,461,869 - -0.1 2,462,037 + BWI76_RS11700 0.20 -2.0 2,462,426 + +0.4 2,462,634 + +0.2 2,462,979 + BWI76_RS11705 0.25 +0.1 2,463,547 - BWI76_RS11705 0.52 +0.9 2,463,739 + BWI76_RS11705 0.62 +0.7 2,464,134 - BWI76_RS11705 0.81 -0.1 2,464,152 + BWI76_RS11705 0.82 +0.4 2,464,354 + -0.6 2,464,364 + -0.1 2,464,364 - -0.1 2,464,443 - -0.4 2,464,458 - -0.4 2,464,567 - -0.9 2,464,988 - BWI76_RS11710 0.51 -0.6 2,465,039 - BWI76_RS11710 0.57 -0.1 2,465,052 + BWI76_RS11710 0.58 +0.3 2,465,137 - BWI76_RS11710 0.68 -0.3
Or see this region's nucleotide sequence