Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2716 and Dshi_2717 are separated by 133 nucleotides Dshi_2717 and Dshi_2718 are separated by 13 nucleotides Dshi_2718 and Dshi_2719 are separated by 55 nucleotides
Dshi_2716: Dshi_2716 - hypothetical protein (RefSeq), at 2,878,109 to 2,878,555
_2716
Dshi_2717: Dshi_2717 - hypothetical protein (RefSeq), at 2,878,689 to 2,879,210
_2717
Dshi_2718: Dshi_2718 - transcriptional regulator, XRE family (RefSeq), at 2,879,224 to 2,879,460
_2718
Dshi_2719: Dshi_2719 - Cobaltochelatase (RefSeq), at 2,879,516 to 2,881,390
_2719
Position (kb)
2879
2880 Strain fitness (log2 ratio)
-1
0
1 at 2878.242 kb on + strand, within Dshi_2716 at 2878.249 kb on + strand, within Dshi_2716 at 2878.286 kb on + strand, within Dshi_2716 at 2878.338 kb on - strand, within Dshi_2716 at 2878.511 kb on + strand at 2878.559 kb on + strand at 2878.687 kb on - strand at 2878.721 kb on + strand at 2878.949 kb on - strand, within Dshi_2717 at 2879.049 kb on - strand, within Dshi_2717 at 2879.193 kb on + strand at 2879.328 kb on + strand, within Dshi_2718 at 2879.328 kb on + strand, within Dshi_2718 at 2879.328 kb on + strand, within Dshi_2718 at 2879.328 kb on + strand, within Dshi_2718 at 2879.336 kb on - strand, within Dshi_2718 at 2879.414 kb on + strand, within Dshi_2718 at 2879.484 kb on - strand at 2879.484 kb on - strand at 2879.507 kb on - strand at 2879.527 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 2,878,242 + Dshi_2716 0.30 -0.2 2,878,249 + Dshi_2716 0.31 +1.1 2,878,286 + Dshi_2716 0.40 +0.5 2,878,338 - Dshi_2716 0.51 -0.7 2,878,511 + -0.7 2,878,559 + -0.7 2,878,687 - -0.3 2,878,721 + -0.1 2,878,949 - Dshi_2717 0.50 -0.2 2,879,049 - Dshi_2717 0.69 -0.2 2,879,193 + -0.5 2,879,328 + Dshi_2718 0.44 +0.3 2,879,328 + Dshi_2718 0.44 -0.8 2,879,328 + Dshi_2718 0.44 -1.0 2,879,328 + Dshi_2718 0.44 -0.1 2,879,336 - Dshi_2718 0.47 -0.2 2,879,414 + Dshi_2718 0.80 +0.2 2,879,484 - +0.4 2,879,484 - +0.5 2,879,507 - +1.4 2,879,527 + +0.1
Or see this region's nucleotide sequence