Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2389
Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Dimethyl Sulfoxide 7.5 vol% |
---|---|---|---|---|---|
remove | |||||
2,523,042 | - | Dshi_2388 | 0.52 | +0.2 | |
2,523,080 | - | Dshi_2388 | 0.54 | -0.5 | |
2,523,141 | - | Dshi_2388 | 0.57 | -0.3 | |
2,523,167 | + | Dshi_2388 | 0.59 | -0.4 | |
2,523,215 | + | Dshi_2388 | 0.61 | +0.7 | |
2,523,270 | + | Dshi_2388 | 0.64 | -0.2 | |
2,523,368 | - | Dshi_2388 | 0.69 | -0.1 | |
2,523,371 | + | Dshi_2388 | 0.69 | -1.2 | |
2,523,507 | + | Dshi_2388 | 0.76 | +0.6 | |
2,523,656 | - | Dshi_2388 | 0.84 | +0.0 | |
2,523,883 | + | -0.2 | |||
2,524,167 | + | Dshi_2389 | 0.31 | +0.1 | |
2,524,264 | - | Dshi_2389 | 0.46 | -0.2 | |
2,524,264 | - | Dshi_2389 | 0.46 | +0.0 | |
2,524,284 | - | Dshi_2389 | 0.49 | +0.1 | |
2,524,603 | - | -1.3 | |||
2,524,735 | - | -0.2 | |||
2,524,872 | + | Dshi_2390 | 0.26 | -2.1 | |
2,525,003 | + | Dshi_2390 | 0.46 | -0.1 | |
2,525,003 | + | Dshi_2390 | 0.46 | -0.2 | |
2,525,149 | - | Dshi_2390 | 0.69 | -0.0 | |
2,525,207 | + | Dshi_2390 | 0.78 | -0.2 | |
2,525,428 | + | -0.1 |
Or see this region's nucleotide sequence