Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2230 and Dshi_2231 are separated by 134 nucleotides Dshi_2231 and Dshi_2232 are separated by 207 nucleotides Dshi_2232 and Dshi_2233 are separated by 129 nucleotides
Dshi_2230: Dshi_2230 - polyhydroxyalkonate synthesis repressor, PhaR (RefSeq), at 2,353,581 to 2,354,141
_2230
Dshi_2231: Dshi_2231 - phasin, PhaP (RefSeq), at 2,354,276 to 2,354,704
_2231
Dshi_2232: Dshi_2232 - phasin, PhaP (RefSeq), at 2,354,912 to 2,355,358
_2232
Dshi_2233: Dshi_2233 - poly(R)-hydroxyalkanoic acid synthase, class I (RefSeq), at 2,355,488 to 2,357,302
_2233
Position (kb)
2354
2355
2356 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2354.057 kb on + strand, within Dshi_2230 at 2354.180 kb on - strand at 2354.229 kb on + strand at 2354.229 kb on + strand at 2354.235 kb on - strand at 2354.256 kb on + strand at 2354.256 kb on + strand at 2354.256 kb on + strand at 2354.263 kb on + strand at 2354.306 kb on - strand at 2354.312 kb on + strand at 2354.414 kb on - strand, within Dshi_2231 at 2354.438 kb on - strand, within Dshi_2231 at 2354.464 kb on + strand, within Dshi_2231 at 2354.472 kb on - strand, within Dshi_2231 at 2354.476 kb on - strand, within Dshi_2231 at 2354.576 kb on - strand, within Dshi_2231 at 2354.656 kb on + strand, within Dshi_2231 at 2354.670 kb on + strand at 2354.728 kb on + strand at 2354.736 kb on - strand at 2354.736 kb on - strand at 2354.736 kb on - strand at 2354.736 kb on - strand at 2354.736 kb on - strand at 2354.736 kb on - strand at 2354.757 kb on + strand at 2354.757 kb on + strand at 2354.757 kb on + strand at 2354.760 kb on - strand at 2354.765 kb on - strand at 2354.769 kb on - strand at 2354.825 kb on - strand at 2354.868 kb on + strand at 2354.870 kb on - strand at 2354.951 kb on - strand at 2355.092 kb on - strand, within Dshi_2232 at 2355.092 kb on - strand, within Dshi_2232 at 2355.126 kb on - strand, within Dshi_2232 at 2355.143 kb on - strand, within Dshi_2232 at 2355.252 kb on - strand, within Dshi_2232 at 2355.294 kb on - strand, within Dshi_2232 at 2355.294 kb on - strand, within Dshi_2232 at 2355.369 kb on + strand at 2355.377 kb on - strand at 2355.413 kb on - strand at 2355.418 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 2,354,057 + Dshi_2230 0.85 -0.2 2,354,180 - +0.4 2,354,229 + -0.2 2,354,229 + -0.4 2,354,235 - -0.9 2,354,256 + -0.1 2,354,256 + +0.5 2,354,256 + -0.6 2,354,263 + -0.1 2,354,306 - +0.7 2,354,312 + +0.7 2,354,414 - Dshi_2231 0.32 -0.3 2,354,438 - Dshi_2231 0.38 +0.5 2,354,464 + Dshi_2231 0.44 -0.5 2,354,472 - Dshi_2231 0.46 +0.9 2,354,476 - Dshi_2231 0.47 -0.1 2,354,576 - Dshi_2231 0.70 -0.2 2,354,656 + Dshi_2231 0.89 -0.2 2,354,670 + -0.1 2,354,728 + +0.2 2,354,736 - -0.2 2,354,736 - +0.3 2,354,736 - -0.1 2,354,736 - -0.1 2,354,736 - +0.7 2,354,736 - -0.1 2,354,757 + -0.1 2,354,757 + +0.1 2,354,757 + +0.1 2,354,760 - -0.2 2,354,765 - +0.3 2,354,769 - -0.2 2,354,825 - -0.1 2,354,868 + -0.3 2,354,870 - +0.2 2,354,951 - -0.4 2,355,092 - Dshi_2232 0.40 -1.0 2,355,092 - Dshi_2232 0.40 -1.8 2,355,126 - Dshi_2232 0.48 +0.0 2,355,143 - Dshi_2232 0.52 -2.1 2,355,252 - Dshi_2232 0.76 -1.9 2,355,294 - Dshi_2232 0.85 -3.8 2,355,294 - Dshi_2232 0.85 -1.6 2,355,369 + -2.8 2,355,377 - -2.3 2,355,413 - -2.8 2,355,418 + -1.3
Or see this region's nucleotide sequence