Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1966 and Dshi_1967 are separated by 12 nucleotides Dshi_1967 and Dshi_1968 are separated by 54 nucleotides
Dshi_1966: Dshi_1966 - dihydrolipoamide dehydrogenase (RefSeq), at 2,074,131 to 2,075,873
_1966
Dshi_1967: Dshi_1967 - catalytic domain of components of various dehydrogenase complexes (RefSeq), at 2,075,886 to 2,077,187
_1967
Dshi_1968: Dshi_1968 - 2-oxo-acid dehydrogenase E1 subunit, homodimeric type (RefSeq), at 2,077,242 to 2,079,899
_1968
Position (kb)
2075
2076
2077
2078 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2075.035 kb on - strand, within Dshi_1966 at 2075.060 kb on + strand, within Dshi_1966 at 2075.068 kb on - strand, within Dshi_1966 at 2075.149 kb on - strand, within Dshi_1966 at 2075.223 kb on + strand, within Dshi_1966 at 2075.240 kb on - strand, within Dshi_1966 at 2075.882 kb on + strand at 2075.961 kb on - strand at 2075.972 kb on + strand at 2076.033 kb on - strand, within Dshi_1967 at 2076.092 kb on + strand, within Dshi_1967 at 2076.160 kb on - strand, within Dshi_1967 at 2076.160 kb on - strand, within Dshi_1967 at 2076.234 kb on - strand, within Dshi_1967 at 2076.281 kb on + strand, within Dshi_1967 at 2076.289 kb on - strand, within Dshi_1967 at 2076.363 kb on + strand, within Dshi_1967 at 2076.424 kb on + strand, within Dshi_1967 at 2076.424 kb on + strand, within Dshi_1967 at 2076.432 kb on - strand, within Dshi_1967 at 2076.432 kb on - strand, within Dshi_1967 at 2076.787 kb on - strand, within Dshi_1967 at 2076.791 kb on - strand, within Dshi_1967 at 2077.107 kb on - strand at 2077.150 kb on - strand at 2077.170 kb on - strand at 2077.216 kb on + strand at 2077.245 kb on + strand at 2077.449 kb on - strand at 2077.518 kb on + strand, within Dshi_1968 at 2077.766 kb on + strand, within Dshi_1968 at 2077.798 kb on - strand, within Dshi_1968 at 2077.809 kb on + strand, within Dshi_1968 at 2077.827 kb on - strand, within Dshi_1968 at 2077.870 kb on + strand, within Dshi_1968 at 2078.021 kb on + strand, within Dshi_1968 at 2078.036 kb on + strand, within Dshi_1968 at 2078.048 kb on + strand, within Dshi_1968 at 2078.076 kb on - strand, within Dshi_1968 at 2078.138 kb on - strand, within Dshi_1968
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 2,075,035 - Dshi_1966 0.52 -0.3 2,075,060 + Dshi_1966 0.53 -0.2 2,075,068 - Dshi_1966 0.54 -0.4 2,075,149 - Dshi_1966 0.58 -0.3 2,075,223 + Dshi_1966 0.63 -0.2 2,075,240 - Dshi_1966 0.64 -0.4 2,075,882 + -0.4 2,075,961 - -1.2 2,075,972 + -1.9 2,076,033 - Dshi_1967 0.11 -0.3 2,076,092 + Dshi_1967 0.16 -1.6 2,076,160 - Dshi_1967 0.21 -0.2 2,076,160 - Dshi_1967 0.21 -3.3 2,076,234 - Dshi_1967 0.27 -1.2 2,076,281 + Dshi_1967 0.30 -1.5 2,076,289 - Dshi_1967 0.31 -1.9 2,076,363 + Dshi_1967 0.37 -0.1 2,076,424 + Dshi_1967 0.41 -1.1 2,076,424 + Dshi_1967 0.41 -0.6 2,076,432 - Dshi_1967 0.42 -0.7 2,076,432 - Dshi_1967 0.42 -0.4 2,076,787 - Dshi_1967 0.69 -0.0 2,076,791 - Dshi_1967 0.70 -0.6 2,077,107 - -0.4 2,077,150 - -0.0 2,077,170 - +0.1 2,077,216 + +0.4 2,077,245 + +0.1 2,077,449 - -0.9 2,077,518 + Dshi_1968 0.10 -1.6 2,077,766 + Dshi_1968 0.20 -1.1 2,077,798 - Dshi_1968 0.21 -2.6 2,077,809 + Dshi_1968 0.21 -1.4 2,077,827 - Dshi_1968 0.22 -1.1 2,077,870 + Dshi_1968 0.24 -0.4 2,078,021 + Dshi_1968 0.29 -1.1 2,078,036 + Dshi_1968 0.30 -1.6 2,078,048 + Dshi_1968 0.30 -1.2 2,078,076 - Dshi_1968 0.31 -1.5 2,078,138 - Dshi_1968 0.34 -0.9
Or see this region's nucleotide sequence