Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0850

Experiment: MoYLS4 with peroxynitrite 200uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQmoB and QmoC are separated by 13 nucleotidesQmoC and DVU0851 are separated by 89 nucleotides DVU0849: QmoB - Quinone-interacting membrane-bound oxidoreductase (Shelley Haveman), at 937,006 to 939,282 QmoB DVU0850: QmoC - Quinone-interacting membrane-bound oxidoreductase (Shelley Haveman), at 939,296 to 940,450 QmoC DVU0851: DVU0851 - hypothetical protein (TIGR), at 940,540 to 941,286 DVU0851 Position (kb) 939 940 941Strain fitness (log2 ratio) -1 0 1at 939.278 kb on + strandat 939.278 kb on + strandat 941.346 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with peroxynitrite 200uM
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939,278 + +0.6
939,278 + -0.4
941,346 + -0.4

Or see this region's nucleotide sequence