Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25930 and BWI76_RS25935 overlap by 14 nucleotides BWI76_RS25935 and BWI76_RS25940 overlap by 80 nucleotides BWI76_RS25940 and BWI76_RS25945 are separated by 21 nucleotides
BWI76_RS25930: BWI76_RS25930 - glutathione-regulated potassium-efflux system protein KefB, at 5,360,341 to 5,362,146
_RS25930
BWI76_RS25935: BWI76_RS25935 - glutathione-regulated potassium-efflux system ancillary protein KefG, at 5,362,133 to 5,362,693
_RS25935
BWI76_RS25940: BWI76_RS25940 - hypothetical protein, at 5,362,614 to 5,362,847
_RS25940
BWI76_RS25945: BWI76_RS25945 - ABC transporter ATP-binding protein, at 5,362,869 to 5,364,773
_RS25945
Position (kb) 5362
5363 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5361.199 kb on + strand, within BWI76_RS25930 at 5361.259 kb on + strand, within BWI76_RS25930 at 5361.267 kb on - strand, within BWI76_RS25930 at 5361.389 kb on + strand, within BWI76_RS25930 at 5361.407 kb on - strand, within BWI76_RS25930 at 5361.478 kb on + strand, within BWI76_RS25930 at 5361.493 kb on + strand, within BWI76_RS25930 at 5361.542 kb on - strand, within BWI76_RS25930 at 5361.692 kb on + strand, within BWI76_RS25930 at 5361.706 kb on - strand, within BWI76_RS25930 at 5361.724 kb on + strand, within BWI76_RS25930 at 5361.741 kb on - strand, within BWI76_RS25930 at 5361.932 kb on - strand, within BWI76_RS25930 at 5362.003 kb on + strand at 5362.211 kb on + strand, within BWI76_RS25935 at 5362.438 kb on - strand, within BWI76_RS25935 at 5362.480 kb on - strand, within BWI76_RS25935 at 5362.480 kb on - strand, within BWI76_RS25935 at 5362.927 kb on - strand at 5362.937 kb on + strand at 5363.187 kb on + strand, within BWI76_RS25945 at 5363.678 kb on + strand, within BWI76_RS25945
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 5,361,199 + BWI76_RS25930 0.48 -2.5 5,361,259 + BWI76_RS25930 0.51 +4.3 5,361,267 - BWI76_RS25930 0.51 -0.1 5,361,389 + BWI76_RS25930 0.58 -0.1 5,361,407 - BWI76_RS25930 0.59 +0.4 5,361,478 + BWI76_RS25930 0.63 +0.4 5,361,493 + BWI76_RS25930 0.64 -0.1 5,361,542 - BWI76_RS25930 0.67 -0.4 5,361,692 + BWI76_RS25930 0.75 -0.4 5,361,706 - BWI76_RS25930 0.76 +0.6 5,361,724 + BWI76_RS25930 0.77 -1.4 5,361,741 - BWI76_RS25930 0.78 -0.6 5,361,932 - BWI76_RS25930 0.88 +0.2 5,362,003 + +1.2 5,362,211 + BWI76_RS25935 0.14 -1.5 5,362,438 - BWI76_RS25935 0.54 -2.1 5,362,480 - BWI76_RS25935 0.62 -0.3 5,362,480 - BWI76_RS25935 0.62 -1.9 5,362,927 - +0.9 5,362,937 + -2.7 5,363,187 + BWI76_RS25945 0.17 +0.7 5,363,678 + BWI76_RS25945 0.42 -0.0
Or see this region's nucleotide sequence