Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15040 and BWI76_RS15045 are separated by 92 nucleotides BWI76_RS15045 and BWI76_RS15050 overlap by 18 nucleotides BWI76_RS15050 and BWI76_RS15055 are separated by 194 nucleotides
BWI76_RS15040: BWI76_RS15040 - putative 2-nitropropane dioxygenase, at 3,147,935 to 3,148,981
_RS15040
BWI76_RS15045: BWI76_RS15045 - LysR family transcriptional regulator, at 3,149,074 to 3,149,910
_RS15045
BWI76_RS15050: BWI76_RS15050 - sugar transporter, at 3,149,893 to 3,151,080
_RS15050
BWI76_RS15055: BWI76_RS15055 - lysine transporter LysE, at 3,151,275 to 3,151,895
_RS15055
Position (kb)
3149
3150
3151
3152 Strain fitness (log2 ratio)
-2
-1
0
1 at 3149.322 kb on - strand, within BWI76_RS15045 at 3149.332 kb on - strand, within BWI76_RS15045 at 3149.625 kb on + strand, within BWI76_RS15045 at 3149.848 kb on - strand at 3149.989 kb on - strand at 3150.125 kb on - strand, within BWI76_RS15050 at 3150.239 kb on - strand, within BWI76_RS15050 at 3150.461 kb on + strand, within BWI76_RS15050 at 3151.182 kb on - strand at 3151.390 kb on + strand, within BWI76_RS15055 at 3151.462 kb on + strand, within BWI76_RS15055 at 3151.577 kb on - strand, within BWI76_RS15055 at 3151.596 kb on + strand, within BWI76_RS15055 at 3151.604 kb on - strand, within BWI76_RS15055 at 3151.627 kb on - strand, within BWI76_RS15055 at 3151.662 kb on - strand, within BWI76_RS15055 at 3151.671 kb on - strand, within BWI76_RS15055 at 3151.673 kb on + strand, within BWI76_RS15055 at 3151.680 kb on + strand, within BWI76_RS15055 at 3151.680 kb on + strand, within BWI76_RS15055 at 3151.681 kb on - strand, within BWI76_RS15055 at 3151.682 kb on - strand, within BWI76_RS15055 at 3151.682 kb on - strand, within BWI76_RS15055 at 3151.688 kb on - strand, within BWI76_RS15055 at 3151.688 kb on - strand, within BWI76_RS15055 at 3151.701 kb on - strand, within BWI76_RS15055 at 3151.708 kb on - strand, within BWI76_RS15055 at 3151.708 kb on - strand, within BWI76_RS15055 at 3151.712 kb on + strand, within BWI76_RS15055 at 3151.727 kb on - strand, within BWI76_RS15055 at 3151.746 kb on + strand at 3151.761 kb on - strand, within BWI76_RS15055 at 3151.822 kb on + strand, within BWI76_RS15055 at 3151.843 kb on - strand at 3151.848 kb on - strand at 3151.871 kb on - strand at 3151.951 kb on + strand at 3151.951 kb on + strand at 3151.951 kb on + strand at 3151.951 kb on + strand at 3151.951 kb on + strand at 3151.959 kb on - strand at 3151.959 kb on - strand at 3151.959 kb on - strand at 3151.990 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 3,149,322 - BWI76_RS15045 0.30 -0.6 3,149,332 - BWI76_RS15045 0.31 -0.8 3,149,625 + BWI76_RS15045 0.66 -0.5 3,149,848 - +1.1 3,149,989 - +0.1 3,150,125 - BWI76_RS15050 0.20 +0.5 3,150,239 - BWI76_RS15050 0.29 +1.6 3,150,461 + BWI76_RS15050 0.48 +0.4 3,151,182 - +0.1 3,151,390 + BWI76_RS15055 0.19 +0.5 3,151,462 + BWI76_RS15055 0.30 -0.2 3,151,577 - BWI76_RS15055 0.49 -0.0 3,151,596 + BWI76_RS15055 0.52 +0.3 3,151,604 - BWI76_RS15055 0.53 -1.2 3,151,627 - BWI76_RS15055 0.57 -1.7 3,151,662 - BWI76_RS15055 0.62 -1.1 3,151,671 - BWI76_RS15055 0.64 -2.0 3,151,673 + BWI76_RS15055 0.64 -1.4 3,151,680 + BWI76_RS15055 0.65 +1.3 3,151,680 + BWI76_RS15055 0.65 +1.3 3,151,681 - BWI76_RS15055 0.65 +0.4 3,151,682 - BWI76_RS15055 0.66 +0.3 3,151,682 - BWI76_RS15055 0.66 +0.3 3,151,688 - BWI76_RS15055 0.67 +0.3 3,151,688 - BWI76_RS15055 0.67 -0.1 3,151,701 - BWI76_RS15055 0.69 -0.7 3,151,708 - BWI76_RS15055 0.70 +0.1 3,151,708 - BWI76_RS15055 0.70 -1.0 3,151,712 + BWI76_RS15055 0.70 +0.1 3,151,727 - BWI76_RS15055 0.73 +0.1 3,151,746 + -0.9 3,151,761 - BWI76_RS15055 0.78 +0.6 3,151,822 + BWI76_RS15055 0.88 +0.9 3,151,843 - -0.1 3,151,848 - +0.3 3,151,871 - -1.5 3,151,951 + -0.0 3,151,951 + +0.6 3,151,951 + +0.7 3,151,951 + +0.1 3,151,951 + -1.4 3,151,959 - -0.7 3,151,959 - -0.5 3,151,959 - -2.1 3,151,990 - +0.6
Or see this region's nucleotide sequence